Crystal structure of ALPN-202 (engineered CD80 vIgD) in complex with PD-L1


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054503 3000071 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054503 3000071 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APK_Ce7tpsA1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PK_CECOD (v294.2)
Cadh_short_C2e7tpsC1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: adh_short_C2ECOD (v294.2)
Dadh_short_C2e7tpsD1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: adh_short_C2ECOD (v294.2)
BPK_Ce7tpsB1 A: beta barrelsX: Nuclear receptor ligand-binding domainH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PK_CECOD (v294.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, C
PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
PF08205CD80-like C2-set immunoglobulin domain (C2-set_2)CD80-like C2-set immunoglobulin domainThese domains belong to the immunoglobulin superfamily. Domain
PF07686Immunoglobulin V-set domain (V-set)Immunoglobulin V-set domainThis domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. Domain
PF08205CD80-like C2-set immunoglobulin domain (C2-set_2)CD80-like C2-set immunoglobulin domainThese domains belong to the immunoglobulin superfamily. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, C
T-lymphocyte activation antigen CD80
Programmed cell death 1 ligand 1
Programmed cell death 1 ligand 1

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, C
P33681
Q9NZQ7
Q9NZQ7

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
TPO Parent Component: THR

AA0038

:  O-phospho-L-threonine MOD:00047