Cryo-EM Structure of a Transition State of Arp2/3 Complex Activation
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| H | SCOP2B Superfamily | Actin-like ATPases | 8040509 | 3000092 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Actin-like ATPases | 8040506 | 3000092 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Arp2/3 complex subunits | 8037903 | 3000751 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Arp2/3 complex 21 kDa subunit ARPC3 | 8037901 | 3001830 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Arp2/3 complex subunits | 8037899 | 3000751 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Arp2/3 complex subunits | 8037898 | 3000751 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Actin-like ATPases | 8037893 | 3000092 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Actin-like ATPases | 8037891 | 3000092 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Actin-like ATPases | 8037889 | 3000092 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I | Peptidase_S9, Peptidase_S15 | e7t5qI1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| H | Peptidase_S9, Peptidase_S15 | e7t5qH1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| G | Peptidase_S9, Peptidase_S15 | e7t5qG1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| F | Peptidase_S9, Peptidase_S15 | e7t5qF1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| E | Peptidase_S9, Peptidase_S15 | e7t5qE1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| D | Peptidase_S9, Peptidase_S15 | e7t5qD1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| C | Peptidase_S9, Peptidase_S15 | e7t5qC1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| B | Peptidase_S9, Peptidase_S15 | e7t5qB1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
| J | e7t5qJ01 | A: alpha bundles | X: Rossmann-like | H: all-alpha NTP pyrophosphatases | T: Hypothetical protein AF_0060 | F: | ECOD (develop294) | |
| A | Peptidase_S9, Peptidase_S15 | e7t5qA1 | A: alpha bundles | X: RNase A-like | H: RNase A-like | T: RNase A-like | F: Peptidase_S9, Peptidase_S15 | ECOD (develop294) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 3.30.1460.20 | Alpha Beta | 2-Layer Sandwich | Yope Regulator | Chain: A, | CATH (utative) |
| C | 2.130.10.10 | Mainly Beta | 7 Propeller | Methylamine Dehydrogenase | Chain H | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01267 | F-actin capping protein alpha subunit (F-actin_cap_A) | F-actin capping protein alpha subunit | - | Family | |
| PF04045 | Arp2/3 complex, 34 kD subunit p34-Arc (P34-Arc) | Arp2/3 complex, 34 kD subunit p34-Arc | - | Family | |
| PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat | |
| PF00022 | Actin (Actin) | Actin | - | Family | |
| PF02205 | WH2 motif (WH2) | WH2 motif | - | Motif | |
| PF01115 | F-actin capping protein, beta subunit (F_actin_cap_B) | F-actin capping protein, beta subunit | - | Family | |
| PF00022 | Actin (Actin) | Actin | - | Family |














