7RY2 | pdb_00007ry2

mSandy2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	GFP	e7ry2H1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
E	GFP	e7ry2E1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
G	GFP	e7ry2G1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
F	GFP	e7ry2F1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
D	GFP	e7ry2D1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
C	GFP	e7ry2C1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
B	GFP	e7ry2B1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)
A	GFP	e7ry2A1	A: beta barrels	X: GFP-like (From Topology)	H: GFP-like (From Topology)	T: GFP-like	F: GFP	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
E, H	PF01353	Green fluorescent protein (GFP)	Green fluorescent protein		Domain
A, B, C, D, F A, B, C, D, F, G	PF01353	Green fluorescent protein (GFP)	Green fluorescent protein		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, H	mSandy2	-	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	-
A, B, C, D, F A, B, C, D, F, G	mSandy2	-	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E, H	IPR000786	Green fluorescent protein, GFP	Family
E, H	IPR011584	Green fluorescent protein-related	Family
E, H	IPR009017	Green fluorescent protein	Homologous Superfamily
A, B, C, D, F A, B, C, D, F, G	IPR000786	Green fluorescent protein, GFP	Family
A, B, C, D, F A, B, C, D, F, G	IPR011584	Green fluorescent protein-related	Family
A, B, C, D, F A, B, C, D, F, G	IPR009017	Green fluorescent protein	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
E, H	NRQ	Parent Component: MET, TYR, GLY RESID: AA0379 PSI-MOD : 2-imino-methionine 5-imidazolinone glycine MOD:00384
A, B, C, D, F A, B, C, D, F, G	CH6	Parent Component: MET, TYR, GLY RESID: AA0379 , AA0183 PSI-MOD : 2-imino-methionine 5-imidazolinone glycine MOD:00384 , (Z)-2,3-didehydrotyrosine MOD:00191

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.