7RY2 | pdb_00007ry2

mSandy2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
H	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	GFP-like	8081043	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Sybindin	e7ry2H1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Sybindin	ECOD (v294.1)
E	Sybindin	e7ry2E1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Sybindin	ECOD (v294.1)
A	Peptidase_M4,Peptidase_M4_C	e7ry2A1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Peptidase_M4,Peptidase_M4_C	ECOD (v294.1)
B	Sybindin	e7ry2B1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Sybindin	ECOD (v294.1)
C	Sybindin	e7ry2C1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Sybindin	ECOD (v294.1)
D	Sybindin	e7ry2D1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Sybindin	ECOD (v294.1)
F	Sybindin	e7ry2F1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Sybindin	ECOD (v294.1)
G	Sybindin	e7ry2G1	A: a/b three-layered sandwiches	X: RNase A-like	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Sybindin	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, H	mSandy2	-	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	-
A, B, C, D, F A, B, C, D, F, G	mSandy2	-	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
E, H	IPR000786	Green fluorescent protein, GFP	Family
E, H	IPR011584	Green fluorescent protein-related	Family
E, H	IPR009017	Green fluorescent protein	Homologous Superfamily
A, B, C, D, F A, B, C, D, F, G	IPR000786	Green fluorescent protein, GFP	Family
A, B, C, D, F A, B, C, D, F, G	IPR011584	Green fluorescent protein-related	Family
A, B, C, D, F A, B, C, D, F, G	IPR009017	Green fluorescent protein	Homologous Superfamily

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
E, H	NRQ	Parent Component: MET, TYR, GLY : AA0379 : 2-imino-methionine 5-imidazolinone glycine MOD:00384
A, B, C, D, F A, B, C, D, F, G	CH6	Parent Component: MET, TYR, GLY : AA0379 , AA0183 : 2-imino-methionine 5-imidazolinone glycine MOD:00384 , (Z)-2,3-didehydrotyrosine MOD:00191

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.