7PWX

dUTPase from M. tuberculosis in complex with Stl

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth HHH]	SCOP2B Superfamily	dUTPase-like	8041602	3001957	SCOP2B (2022-06-29)
B [auth III]	SCOP2B Superfamily	dUTPase-like	8041602	3001957	SCOP2B (2022-06-29)
C [auth JJJ]	SCOP2B Superfamily	dUTPase-like	8041602	3001957	SCOP2B (2022-06-29)
D [auth KKK]	SCOP2B Superfamily	dUTPase-like	8041602	3001957	SCOP2B (2022-06-29)
E [auth LLL]	SCOP2B Superfamily	dUTPase-like	8041602	3001957	SCOP2B (2022-06-29)
F [auth MMM]	SCOP2B Superfamily	dUTPase-like	8041602	3001957	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth HHH]	PF00692	e7pwxHHH1	A: beta barrels	X: beta-clip	H: dUTPase-like (From Topology)	T: dUTPase-like	F: PF00692	ECOD (1.6)
B [auth III]	PF00692	e7pwxIII1	A: beta barrels	X: beta-clip	H: dUTPase-like (From Topology)	T: dUTPase-like	F: PF00692	ECOD (1.6)
C [auth JJJ]	PF00692	e7pwxJJJ1	A: beta barrels	X: beta-clip	H: dUTPase-like (From Topology)	T: dUTPase-like	F: PF00692	ECOD (1.6)
D [auth KKK]	PF00692	e7pwxKKK1	A: beta barrels	X: beta-clip	H: dUTPase-like (From Topology)	T: dUTPase-like	F: PF00692	ECOD (1.6)
E [auth LLL]	PF00692	e7pwxLLL1	A: beta barrels	X: beta-clip	H: dUTPase-like (From Topology)	T: dUTPase-like	F: PF00692	ECOD (1.6)
F [auth MMM]	PF00692	e7pwxMMM1	A: beta barrels	X: beta-clip	H: dUTPase-like (From Topology)	T: dUTPase-like	F: PF00692	ECOD (1.6)
G [auth CCC]	PF01381	e7pwxCCC1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: PF01381	ECOD (1.6)
G [auth CCC]	F_UNCLASSIFIED	e7pwxCCC2	A: alpha complex topology	X: Stl repressor, middle domain (From Topology)	H: Stl repressor, middle domain (From Topology)	T: Stl repressor, middle domain	F: F_UNCLASSIFIED	ECOD (1.6)
H [auth DDD]	PF01381	e7pwxDDD1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: PF01381	ECOD (1.6)
H [auth DDD]	F_UNCLASSIFIED	e7pwxDDD2	A: alpha complex topology	X: Stl repressor, middle domain (From Topology)	H: Stl repressor, middle domain (From Topology)	T: Stl repressor, middle domain	F: F_UNCLASSIFIED	ECOD (1.6)
I [auth EEE]	PF01381	e7pwxEEE1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: PF01381	ECOD (1.6)
I [auth EEE]	F_UNCLASSIFIED	e7pwxEEE2	A: alpha complex topology	X: Stl repressor, middle domain (From Topology)	H: Stl repressor, middle domain (From Topology)	T: Stl repressor, middle domain	F: F_UNCLASSIFIED	ECOD (1.6)
J [auth FFF]	PF01381	e7pwxFFF1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: PF01381	ECOD (1.6)
J [auth FFF]	F_UNCLASSIFIED	e7pwxFFF2	A: alpha complex topology	X: Stl repressor, middle domain (From Topology)	H: Stl repressor, middle domain (From Topology)	T: Stl repressor, middle domain	F: F_UNCLASSIFIED	ECOD (1.6)
K [auth GGG]	PF01381	e7pwxGGG1	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: PF01381	ECOD (1.6)
K [auth GGG]	F_UNCLASSIFIED	e7pwxGGG2	A: alpha complex topology	X: Stl repressor, middle domain (From Topology)	H: Stl repressor, middle domain (From Topology)	T: Stl repressor, middle domain	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth AAA]	F_UNCLASSIFIED	e7pwxAAA2	A: alpha arrays	X: HTH	H: HTH	T: tetra-helical, lambda repressor-like	F: F_UNCLASSIFIED	ECOD (1.6)
L [auth AAA]	F_UNCLASSIFIED	e7pwxAAA1	A: alpha complex topology	X: Stl repressor, middle domain (From Topology)	H: Stl repressor, middle domain (From Topology)	T: Stl repressor, middle domain	F: F_UNCLASSIFIED	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], F [auth MMM]	PF00692	dUTPase (dUTPase)	dUTPase	dUTPase hydrolyses dUTP to dUMP and pyrophosphate.	Domain
G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], L [auth AAA]	PF01381	Helix-turn-helix (HTH_3)	Helix-turn-helix	This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be ...	This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be that of a DNA-binding regulator, the function of most other members, so is not necessarily characteristic of the whole family [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], F [auth MMM]	Deoxyuridine 5'-triphosphate nucleotidohydrolase	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding pyrophosphatase activity nucleoside triphosphate diphosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides dUTP diphosphatase activity hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	pyrimidine deoxyribonucleotide catabolic process catabolic process deoxyribonucleotide catabolic process pyrimidine deoxyribonucleotide metabolic process nucleoside triphosphate catabolic process pyrimidine-containing compound catabolic process dUTP metabolic process organophosphate catabolic process carbohydrate derivative metabolic process pyrimidine nucleoside triphosphate catabolic process nucleoside phosphate catabolic process deoxyribose phosphate catabolic process pyrimidine nucleotide metabolic process nucleobase-containing compound metabolic process pyrimidine nucleotide catabolic process pyrimidine deoxyribonucleotide catabolic process catabolic process deoxyribonucleotide catabolic process pyrimidine deoxyribonucleotide metabolic process nucleoside triphosphate catabolic process pyrimidine-containing compound catabolic process dUTP metabolic process organophosphate catabolic process carbohydrate derivative metabolic process pyrimidine nucleoside triphosphate catabolic process nucleoside phosphate catabolic process deoxyribose phosphate catabolic process pyrimidine nucleotide metabolic process nucleobase-containing compound metabolic process pyrimidine nucleotide catabolic process organic substance metabolic process deoxyribonucleotide metabolic process nucleobase-containing small molecule metabolic process phosphate-containing compound metabolic process pyrimidine deoxyribonucleoside triphosphate metabolic process small molecule metabolic process dUTP catabolic process phosphorus metabolic process nucleotide catabolic process pyrimidine deoxyribonucleoside triphosphate catabolic process nucleoside phosphate metabolic process organonitrogen compound catabolic process carbohydrate derivative catabolic process pyrimidine-containing compound metabolic process organonitrogen compound metabolic process pyrimidine nucleoside triphosphate metabolic process cellular metabolic process 2'-deoxyribonucleotide metabolic process primary metabolic process nucleotide metabolic process deoxyribose phosphate metabolic process organic cyclic compound catabolic process nucleobase-containing compound catabolic process organic cyclic compound metabolic process organophosphate metabolic process metabolic process cellular process nucleoside triphosphate metabolic process organic substance catabolic process nucleotide biosynthetic process organonitrogen compound biosynthetic process deoxyribonucleotide biosynthetic process pyrimidine deoxyribonucleotide biosynthetic process organic substance biosynthetic process 2'-deoxyribonucleotide biosynthetic process dUMP biosynthetic process deoxyribonucleoside monophosphate metabolic process dUMP metabolic process biosynthetic process organophosphate biosynthetic process organic cyclic compound biosynthetic process nucleoside phosphate biosynthetic process pyrimidine nucleoside monophosphate biosynthetic process deoxyribose phosphate biosynthetic process pyrimidine deoxyribonucleoside monophosphate metabolic process deoxyribonucleoside monophosphate biosynthetic process pyrimidine-containing compound biosynthetic process pyrimidine deoxyribonucleoside monophosphate biosynthetic process nucleoside monophosphate metabolic process carbohydrate derivative biosynthetic process pyrimidine nucleoside monophosphate metabolic process nucleobase-containing compound biosynthetic process nucleoside monophosphate biosynthetic process pyrimidine nucleotide biosynthetic process	-
G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], L [auth AAA]	Orf20	DNA binding binding organic cyclic compound binding nucleic acid binding	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], F [auth MMM]	IPR008181	Deoxyuridine triphosphate nucleotidohydrolase	Family
A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], F [auth MMM]	IPR033704	dUTPase, trimeric	Domain
A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], F [auth MMM]	IPR029054	dUTPase-like	Domain
A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], A [auth HHH], B [auth III], C [auth JJJ], D [auth KKK], E [auth LLL], F [auth MMM]	IPR036157	dUTPase-like superfamily	Homologous Superfamily
G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], L [auth AAA]	IPR001387	Cro/C1-type helix-turn-helix domain	Domain
G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], G [auth CCC], H [auth DDD], I [auth EEE], J [auth FFF], K [auth GGG], L [auth AAA]	IPR010982	Lambda repressor-like, DNA-binding domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.