7PAF | pdb_00007paf

Streptococcus pneumoniae choline importer LicB in lipid nanodiscs


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DEamAe7pafD1 A: alpha bundlesX: Drug/Metabolite transporter (From Topology)H: Drug/Metabolite transporter (From Topology)T: Drug/Metabolite transporterF: EamAECOD (1.6)
B [auth A]EamAe7pafA1 A: alpha bundlesX: Drug/Metabolite transporter (From Topology)H: Drug/Metabolite transporter (From Topology)T: Drug/Metabolite transporterF: EamAECOD (1.6)
CV-set_1e7pafC1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_1ECOD (1.6)
A [auth B]V-set_1e7pafB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_1ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
C2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)
A [auth B]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
A [auth B],
C
Heavy ChainIGHV1 -licb proteinSAbDab (2025-12-19)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth A],
D
PF00892EamA-like transporter family (EamA)EamA-like transporter familyThis family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this ...This family includes many hypothetical membrane proteins of unknown function. Many of the proteins contain two copies of the aligned region. The family used to be known as DUF6. Members of this family usually carry 5+5 transmembrane domains, and this domain attempts to model five of these.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth A],
D
LicB protein- -
A [auth B],
C
Nanobody---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth A],
D
IPR000620EamA domainDomain

Membrane Protein Annotation: PDBTM PDBTM Database Homepage