Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyL domain-like8041639 3001010 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGrowth factor receptor domain-like8041644 3000398 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyGrowth factor receptor domain-like8041643 3000398 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyL domain-like8041641 3001010 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyL domain-like8043690 3001010 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyGrowth factor receptor domain-like8043692 3000398 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyGrowth factor receptor domain-like8043694 3000398 SCOP2B (2022-06-29)
C [auth B]SCOP2B SuperfamilyL domain-like8043691 3001010 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ARecep_L_domaine7mn8A2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: Recep_L_domainECOD (1.6)
AGF_recep_IVe7mn8A4 A: few secondary structure elementsX: EGF-likeH: Growth factor receptor domain (From Topology)T: Growth factor receptor domainF: GF_recep_IVECOD (1.6)
AFurin-likee7mn8A3 A: few secondary structure elementsX: EGF-likeH: Growth factor receptor domain (From Topology)T: Growth factor receptor domainF: Furin-likeECOD (1.6)
B [auth H]EGFe7mn8H1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: EGFECOD (1.6)
C [auth B]Recep_L_domaine7mn8B2 A: beta duplicates or obligate multimersX: Single-stranded right-handed beta-helixH: Leucine-rich repeats (From Topology)T: Leucine-rich repeatsF: Recep_L_domainECOD (1.6)
C [auth B]GF_recep_IVe7mn8B3 A: few secondary structure elementsX: EGF-likeH: Growth factor receptor domain (From Topology)T: Growth factor receptor domainF: GF_recep_IVECOD (1.6)
C [auth B]Furin-likee7mn8B4 A: few secondary structure elementsX: EGF-likeH: Growth factor receptor domain (From Topology)T: Growth factor receptor domainF: Furin-likeECOD (1.6)
D [auth C]C1-set_4e7mn8C2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_4ECOD (1.6)
D [auth C]V-sete7mn8C1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-setECOD (1.6)
E [auth D]V-set_8e7mn8D1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: V-set_8ECOD (1.6)
E [auth D]C1-set_1e7mn8D2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: C1-set_1ECOD (1.6)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
D [auth C]Light ChainIGKV1 Kappareceptor tyrosine-protein kinase erbb-2,maltose/maltodextrin-binding periplasmic protein SAbDab (2024-04-19)
E [auth D]Heavy ChainIGHV3 -receptor tyrosine-protein kinase erbb-2,maltose/maltodextrin-binding periplasmic protein SAbDab (2024-04-19)

Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage

ChainNameTargetProvenance Source
D [auth C] Cinrebafusp ERBB2/CD340/HER2, CD3ETherapeutic SAbDab (2024-04-19)
E [auth D] Anvatabart ERBB2/CD340/HER2, CD3ETherapeutic SAbDab (2024-04-19)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00757Furin-like cysteine rich region (Furin-like)Furin-like cysteine rich region- Domain
PF01030Receptor L domain (Recep_L_domain)Receptor L domain- Repeat
PF14843Growth factor receptor domain IV (GF_recep_IV)Growth factor receptor domain IVThis is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1].Domain
B [auth H]PF00008EGF-like domain (EGF)EGF-like domainThere is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ...There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is the main reason of discrepancy between swiss-prot domain start/end and Pfam). The family is hard to model due to many similar but different sub-types of EGF domains. Pfam certainly misses a number of EGF domains.
Domain
C [auth B]PF00757Furin-like cysteine rich region (Furin-like)Furin-like cysteine rich region- Domain
C [auth B]PF01030Receptor L domain (Recep_L_domain)Receptor L domain- Repeat
C [auth B]PF14843Growth factor receptor domain IV (GF_recep_IV)Growth factor receptor domain IVThis is the fourth extracellular domain of receptor tyrosine protein kinases. Interaction between this domain and the furin-like domain (Pfam:PF00757) regulates the binding of ligands to the receptor L domains (Pfam:PF01030) [1].Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Receptor tyrosine-protein kinase erbB-3
B [auth H]Isoform 6 of Pro-neuregulin-1, membrane-bound isoform
C [auth B]Receptor tyrosine-protein kinase erbB-2,Maltose/maltodextrin-binding periplasmic protein
D [auth C]Trastuzumab Fab Light Chain---
E [auth D]Trastuzumab Fab Heavy Chain---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR016245Tyrosine protein kinase, EGF/ERB/XmrK receptorFamily
IPR000719Protein kinase domainDomain
IPR036941Receptor L-domain superfamilyHomologous Superfamily
IPR032778Growth factor receptor domain 4Domain
IPR006212Furin-like repeatRepeat
IPR000494Receptor L-domainDomain
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
IPR006211Furin-like cysteine-rich domainDomain
IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily
B [auth H]IPR036179Immunoglobulin-like domain superfamilyHomologous Superfamily
B [auth H]IPR013783Immunoglobulin-like foldHomologous Superfamily
B [auth H]IPR007110Immunoglobulin-like domainDomain
B [auth H]IPR003599Immunoglobulin subtypeDomain
B [auth H]IPR040180NeuregulinFamily
B [auth H]IPR003598Immunoglobulin subtype 2Domain
B [auth H]IPR000742EGF-like domainDomain
B [auth H]IPR013098Immunoglobulin I-setDomain
B [auth H]IPR018250Neuregulin-1Family
B [auth H]IPR002154Neuregulin, C-terminalDomain
C [auth B]IPR006061Solute-binding family 1, conserved siteConserved Site
C [auth B]IPR006060Maltose/Cyclodextrin ABC transporter, substrate-binding proteinFamily
C [auth B]IPR006059Bacterial-type extracellular solute-binding proteinFamily
C [auth B]IPR016245Tyrosine protein kinase, EGF/ERB/XmrK receptorFamily
C [auth B]IPR008266Tyrosine-protein kinase, active siteActive Site
C [auth B]IPR020635Tyrosine-protein kinase, catalytic domainDomain
C [auth B]IPR000719Protein kinase domainDomain
C [auth B]IPR036941Receptor L-domain superfamilyHomologous Superfamily
C [auth B]IPR032778Growth factor receptor domain 4Domain
C [auth B]IPR049328Epidermal growth factor receptor-like, transmembrane-juxtamembrane segmentDomain
C [auth B]IPR006212Furin-like repeatRepeat
C [auth B]IPR000494Receptor L-domainDomain
C [auth B]IPR017441Protein kinase, ATP binding siteBinding Site
C [auth B]IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
C [auth B]IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
C [auth B]IPR006211Furin-like cysteine-rich domainDomain
C [auth B]IPR009030Growth factor receptor cysteine-rich domain superfamilyHomologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosP21860
B [auth H]PharosQ02297
C [auth B]PharosP04626