7LT3
NHEJ Long-range synaptic complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | SPOC domain-like | 8035571 | 3000675 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | vWA-like | 8035574 | 3000832 | SCOP2B (2022-06-29) |
K [auth J] | SCOP2B Superfamily | vWA-like | 8035574 | 3000832 | SCOP2B (2022-06-29) |
K [auth J] | SCOP2B Superfamily | SPOC domain-like | 8035571 | 3000675 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | vWA-like | 8035579 | 3000832 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SPOC domain-like | 8035577 | 3000675 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | vWA-like | 8035579 | 3000832 | SCOP2B (2022-06-29) |
L [auth K] | SCOP2B Superfamily | SPOC domain-like | 8035577 | 3000675 | SCOP2B (2022-06-29) |
R [auth P] | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
R [auth P] | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8036636 | 3001502 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
G [auth F] | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8036636 | 3001502 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8036636 | 3001502 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
Q [auth O] | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8036633 | 3001319 | SCOP2B (2022-06-29) |
Q [auth O] | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8036636 | 3001502 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051827 | 3001319 | SCOP2B (2022-06-29) |
I [auth H] | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8051828 | 3001502 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | XRCC4 C-terminal oligomerization domain-like | 8051828 | 3001502 | SCOP2B (2022-06-29) |
J [auth I] | SCOP2B Superfamily | XRCC4 N-terminal domain-like | 8051827 | 3001319 | SCOP2B (2022-06-29) |
S [auth X] | SCOP2B Superfamily | DNA ligase IV Xrcc4-binding domain-like | 8095958 | 3002713 | SCOP2B (2022-06-29) |
T [auth Y] | SCOP2B Superfamily | DNA ligase IV Xrcc4-binding domain-like | 8095958 | 3002713 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF02735,PF03730 | e7lt3A1 | A: beta barrels | X: SPOC domain-like | H: SPOC domain-related | T: Ku70/80 subunit middle domain | F: PF02735,PF03730 | ECOD (1.6) |
A | PF03731 | e7lt3A2 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: PF03731 | ECOD (1.6) |
K [auth J] | PF02735,PF03730 | e7lt3J2 | A: beta barrels | X: SPOC domain-like | H: SPOC domain-related | T: Ku70/80 subunit middle domain | F: PF02735,PF03730 | ECOD (1.6) |
K [auth J] | PF03731 | e7lt3J1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: PF03731 | ECOD (1.6) |
B | PF02735,PF03730 | e7lt3B1 | A: beta barrels | X: SPOC domain-like | H: SPOC domain-related | T: Ku70/80 subunit middle domain | F: PF02735,PF03730 | ECOD (1.6) |
B | PF03731 | e7lt3B2 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: PF03731 | ECOD (1.6) |
L [auth K] | PF02735,PF03730 | e7lt3K2 | A: beta barrels | X: SPOC domain-like | H: SPOC domain-related | T: Ku70/80 subunit middle domain | F: PF02735,PF03730 | ECOD (1.6) |
L [auth K] | PF03731 | e7lt3K1 | A: a/b three-layered sandwiches | X: HAD domain-like | H: HAD domain-related | T: vWA-like | F: PF03731 | ECOD (1.6) |
R [auth P] | PF06632 | e7lt3P1 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
R [auth P] | F_UNCLASSIFIED | e7lt3P3 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
R [auth P] | PF21924 | e7lt3P2 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
G [auth F] | PF06632 | e7lt3F3 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
G [auth F] | F_UNCLASSIFIED | e7lt3F1 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
G [auth F] | PF21924 | e7lt3F2 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
H [auth G] | PF06632 | e7lt3G1 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
H [auth G] | F_UNCLASSIFIED | e7lt3G3 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
H [auth G] | PF21924 | e7lt3G2 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
Q [auth O] | PF06632 | e7lt3O3 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF06632 | ECOD (1.6) |
Q [auth O] | F_UNCLASSIFIED | e7lt3O2 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
Q [auth O] | PF21924 | e7lt3O1 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21924 | ECOD (1.6) |
I [auth H] | PF09302 | e7lt3H1 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF09302 | ECOD (1.6) |
I [auth H] | F_UNCLASSIFIED | e7lt3H3 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
I [auth H] | PF21928 | e7lt3H2 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21928 | ECOD (1.6) |
J [auth I] | PF09302 | e7lt3I3 | A: beta barrels | X: XRCC4, N-terminal domain-like | H: XRCC4, N-terminal domain (From Topology) | T: XRCC4, N-terminal domain | F: PF09302 | ECOD (1.6) |
J [auth I] | F_UNCLASSIFIED | e7lt3I1 | A: alpha arrays | X: HTH | H: HTH | T: HTH motif inserted in other structures | F: F_UNCLASSIFIED | ECOD (1.6) |
J [auth I] | PF21928 | e7lt3I2 | A: alpha duplicates or obligate multimers | X: XRCC4 C-terminal oligomerization domain (From Topology) | H: XRCC4 C-terminal oligomerization domain (From Topology) | T: XRCC4 C-terminal oligomerization domain | F: PF21928 | ECOD (1.6) |
S [auth X] | PF00533 | e7lt3X1 | A: a/b three-layered sandwiches | X: BRCT domain (From Topology) | H: BRCT domain (From Topology) | T: BRCT domain | F: PF00533 | ECOD (1.6) |
T [auth Y] | PF00533 | e7lt3Y2 | A: a/b three-layered sandwiches | X: BRCT domain (From Topology) | H: BRCT domain (From Topology) | T: BRCT domain | F: PF00533 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, K [auth J] | PF02735 | Ku70/Ku80 beta-barrel domain (Ku) | Ku70/Ku80 beta-barrel domain | The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-bi ... | Domain |
A, K [auth J] | PF03730 | Ku70/Ku80 C-terminal arm (Ku_C) | Ku70/Ku80 C-terminal arm | - | Family |
A, K [auth J] | PF03731 | Ku70/Ku80 N-terminal alpha/beta domain (Ku_N) | Ku70/Ku80 N-terminal alpha/beta domain | The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal ... | Domain |
B, L [auth K] | PF02735 | Ku70/Ku80 beta-barrel domain (Ku) | Ku70/Ku80 beta-barrel domain | The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the central DNA-bi ... | Domain |
B, L [auth K] | PF03731 | Ku70/Ku80 N-terminal alpha/beta domain (Ku_N) | Ku70/Ku80 N-terminal alpha/beta domain | The Ku heterodimer (composed of Ku70 Swiss:P12956 and Ku80 Swiss:P13010) contributes to genomic integrity through its ability to bind DNA double-strand breaks and facilitate repair by the non-homologous end-joining pathway. This is the amino terminal ... | Domain |
C, M [auth L] | PF08163 | DNA-dependent protein kinase catalytic subunit, CC3 (DNAPKcs_CC3) | DNA-dependent protein kinase catalytic subunit, CC3 | - | Repeat |
C, M [auth L] | PF02260 | FATC domain (FATC) | FATC domain | - | Family |
C, M [auth L] | PF20502 | DNA-dependent protein kinase catalytic subunit, CC1/2 (DNAPKcs_CC1-2) | DNA-dependent protein kinase catalytic subunit, CC1/2 | - | Repeat |
C, M [auth L] | PF19704 | DNA-PKcs, CC5 (DNAPKcs_CC5) | DNA-PKcs, CC5 | - | Repeat |
C, M [auth L] | PF02259 | FAT domain (FAT) | FAT domain | - | Repeat |
G [auth F], H [auth G], Q [auth O], R [auth P] | PF06632 | DNA double-strand break repair and V(D)J recombination protein XRCC4 (XRCC4) | DNA double-strand break repair and V(D)J recombination protein XRCC4 | - | Family |
I [auth H], J [auth I] | PF09302 | XLF-Cernunnos, XRcc4-like factor, NHEJ component (XLF) | XLF-Cernunnos, XRcc4-like factor, NHEJ component | - | Family |
S [auth X], T [auth Y] | PF11411 | DNA ligase IV (DNA_ligase_IV) | DNA ligase IV | - | Family |
S [auth X], T [auth Y] | PF00533 | BRCA1 C Terminus (BRCT) domain (BRCT) | BRCA1 C Terminus (BRCT) domain | - | Family |