DapE enzyme from Shigella flexneri
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | Epimerase | e7lgpB1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Epimerase | ECOD (v294.1) |
| A | Epimerase | e7lgpA1 | A: a/b three-layered sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Epimerase | ECOD (v294.1) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01546 | Peptidase family M20/M25/M40 (Peptidase_M20) | Peptidase family M20/M25/M40 | - | Family | |
| PF07687 | Peptidase dimerisation domain (M20_dimer) | Peptidase dimerisation domain | This domain consists of 4 beta strands and two alpha helices which make up the dimerisation surface of members of the M20 family of peptidases [1]. This family includes a range of zinc metallopeptidases belonging to several families in the peptidase ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005941 | Succinyl-diaminopimelate desuccinylase, proteobacteria | Family | |
| IPR002933 | Peptidase M20 | Family | |
| IPR050072 | Peptidase M20A family, bacterial cell wall biosynthesis | Family | |
| IPR001261 | ArgE/DapE/ACY1/CPG2/YscS, conserved site | Conserved Site | |
| IPR036264 | Bacterial exopeptidase dimerisation domain | Homologous Superfamily | |
| IPR011650 | Peptidase M20, dimerisation domain | Domain |














