7L9P | pdb_00007l9p

Structure of human SHLD2-SHLD3-REV7-TRIP13(E253Q) complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth K]SCOP2B SuperfamilyHORMA/p31comet-like 8058134 3000150 SCOP2B (2022-06-29)
I [auth J]SCOP2B SuperfamilyHORMA/p31comet-like 8058134 3000150 SCOP2B (2022-06-29)
H [auth I]SCOP2B SuperfamilyHORMA/p31comet-like 8058134 3000150 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyHORMA/p31comet-like 8058134 3000150 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth K]Omp85e7l9pK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)
I [auth J]Omp85e7l9pJ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)
H [auth I]Med22e7l9pI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Med22ECOD (v294.1)
GOmp85e7l9pG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)
FOmp85e7l9pF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)
EOmp85e7l9pE1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)
DOmp85e7l9pD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)
COmp85e7l9pC1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)
BMed22e7l9pB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Med22ECOD (v294.1)
AOmp85e7l9pA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Omp85ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G,
H [auth I],
I [auth J],
J [auth K]
PF02301HORMA domain (HORMA)HORMA domainThe HORMA (for Hop1p, Rev7p and MAD2) domain has been suggested to recognise chromatin states that result from DNA adducts, double stranded breaks or non-attachment to the spindle and acts as an adaptor that recruits other proteins. MAD2 is a spindle ...The HORMA (for Hop1p, Rev7p and MAD2) domain has been suggested to recognise chromatin states that result from DNA adducts, double stranded breaks or non-attachment to the spindle and acts as an adaptor that recruits other proteins. MAD2 is a spindle checkpoint protein which prevents progression of the cell cycle upon detection of a defect in mitotic spindle integrity.
Domain
A, B, C, D, E
PF23242TRIP13-like, AAA+ ATPase lid C-terminal domain (AAA_lid_TRIP13_C)TRIP13-like, AAA+ ATPase lid C-terminal domainThis domain is found at the C-terminal end of human Pachytene checkpoint protein 2 homolog (TRIP13) and similar eukaryotic proteins. It is normally found associated to Pfam:PF00004 and is predicted to show an alpha-helical configuration. Domain
A, B, C, D, E
PF00004ATPase family associated with various cellular activities (AAA) (AAA)ATPase family associated with various cellular activities (AAA)AAA family proteins often perform chaperone-like functions that assist in the assembly, operation, or disassembly of protein complexes [2]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
G,
H [auth I],
I [auth J],
J [auth K]
Mitotic spindle assembly checkpoint protein MAD2B
K [auth Y],
L [auth X]
Shieldin complex subunit 2, Shieldin complex subunit 3 chimera-
A, B, C, D, E
Pachytene checkpoint protein 2 homolog

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
G,
H [auth I],
I [auth J],
J [auth K]
PharosQ9UI95
K [auth Y],
L [auth X]
PharosQ86V20
A, B, C, D, E
PharosQ15645