Cryo-EM structure of the human 39S mitoribosomal subunit in complex with RRFmt and EF-G2mt.
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| I [auth O] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8033689 | 3000995 | SCOP2B (2022-06-29) |
| G [auth L] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072072 | 3000433 | SCOP2B (2022-06-29) |
| F [auth K] | SCOP2B Superfamily | Ribosomal protein L13 | 8100460 | 3001134 | SCOP2B (2022-06-29) |
| EB [auth z] | SCOP2B Superfamily | Ribosome recycling factor, RRF | 8100392 | 3001524 | SCOP2B (2022-06-29) |
| DB [auth TC] | SCOP2B Superfamily | ClpS-like | 8098740 | 3000936 | SCOP2B (2022-06-29) |
| PA [auth 9] | SCOP2B Superfamily | Mitochondrial ribosomal protein L27-like | 8053893 | 3002240 | SCOP2B (2022-06-29) |
| D [auth F] | SCOP2B Superfamily | Ribosomal protein L4 | 8080706 | 3001146 | SCOP2B (2022-06-29) |
| U [auth 4] | SCOP2B Superfamily | Ribosomal protein L36 | 8083324 | 3001346 | SCOP2B (2022-06-29) |
| R [auth 1] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8075050 | 3001320 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| I [auth O] | Ribosomal_L17 | e7l20O1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Prokaryotic ribosomal protein L17 (From Topology) | T: Prokaryotic ribosomal protein L17 | F: Ribosomal_L17 | ECOD (1.6) |
| H [auth M] | Ribosomal_L27A | e7l20M1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal proteins L15p and L18e (From Topology) | T: Ribosomal proteins L15p and L18e | F: Ribosomal_L27A | ECOD (1.6) |
| G [auth L] | Ribosomal_L14 | e7l20L1 | A: beta barrels | X: Ribosomal protein L14-like | H: Ribosomal protein L14-related (From Topology) | T: Ribosomal protein L14-related | F: Ribosomal_L14 | ECOD (1.6) |
| F [auth K] | Ribosomal_L13 | e7l20K1 | A: a/b three-layered sandwiches | X: Ribosomal protein L13/L15p/L18e/L32e | H: Ribosomal protein L13 and L16-A (From Topology) | T: Ribosomal protein L13 and L16-A | F: Ribosomal_L13 | ECOD (1.6) |
| FB [auth w] | GTP_EFTU_D2 | e7l20w5 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: GTP_EFTU_D2 | ECOD (1.6) |
| FB [auth w] | EFG_IV | e7l20w2 | A: a+b two layers | X: Ribosomal protein S5 domain 2-like (From Topology) | H: Ribosomal protein S5 domain 2-like (From Topology) | T: Ribosomal protein S5 domain 2-like | F: EFG_IV | ECOD (1.6) |
| FB [auth w] | EFG_C | e7l20w1 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: EFG_C | ECOD (1.6) |
| FB [auth w] | EFG_II | e7l20w4 | A: a+b two layers | X: Alpha-beta plaits | H: EF-G C-terminal domain-like (From Topology) | T: EF-G C-terminal domain-like | F: EFG_II | ECOD (1.6) |
| FB [auth w] | MnmE_helical_2nd | e7l20w3 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: MnmE_helical_2nd | ECOD (1.6) |
| EB [auth z] | RRF | e7l20z1 | A: a+b two layers | X: RRF/tRNA synthetase additional domain-like | H: Ribosome recycling factor, RRF (From Topology) | T: Ribosome recycling factor, RRF | F: RRF | ECOD (1.6) |
| BB [auth TA] | Ribosomal_L12_N_1 | e7l20TA1 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: Ribosomal_L12_N_1 | ECOD (1.6) |
| DB [auth TC] | Ribosomal_L12 | e7l20TC1 | A: a+b two layers | X: ClpS-like | H: ClpS-related (From Topology) | T: ClpS-related | F: Ribosomal_L12 | ECOD (1.6) |
| CB [auth TB] | Ribosomal_L12_N_1 | e7l20TB1 | A: alpha duplicates or obligate multimers | X: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | H: Ribosomal protein L7/12, oligomerisation (N-terminal) domain (From Topology) | T: Ribosomal protein L7/12, oligomerisation (N-terminal) domain | F: Ribosomal_L12_N_1 | ECOD (1.6) |
| ZA [auth Q] | Ribosomal_L19 | e7l20Q1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L19 | ECOD (1.6) |
| YA [auth s] | PDCD9 | e7l20s1 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PDCD9 | ECOD (1.6) |
| XA [auth p] | RF-1_N | e7l20p1 | A: a+b two layers | X: dsRBD-like | H: Peptidyl-tRNA hydrolase domain-like (From Topology) | T: Peptidyl-tRNA hydrolase domain-like | F: RF-1_N | ECOD (1.6) |
| E [auth H] | Ribosomal_L9_N_1 | e7l20H1 | A: a+b two layers | X: L9 N-domain-like | H: L9 N-domain-like (From Topology) | T: L9 N-domain-like | F: Ribosomal_L9_N_1 | ECOD (1.6) |
| VA [auth k] | MRP_L53 | e7l20k1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: MRP_L53 | ECOD (1.6) |
| UA [auth h] | Ribosomal_L50 | e7l20h1 | A: alpha bundles | X: ACP-like | H: Acyl-carrier protein (ACP) (From Topology) | T: Acyl-carrier protein (ACP) | F: Ribosomal_L50 | ECOD (1.6) |
| TA [auth f] | Ribosomal_S10_2 | e7l20f1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein S10 (From Topology) | T: Ribosomal protein S10 | F: Ribosomal_S10_2 | ECOD (1.6) |
| SA [auth d] | Tim44 | e7l20d1 | A: a+b two layers | X: Cystatin-like | H: NTF2-like (From Topology) | T: NTF2-like | F: Tim44 | ECOD (1.6) |
| RA [auth c] | Ribonucleas_3_3 | e7l20c2 | A: alpha arrays | X: RNase III catalytic domain-like (From Topology) | H: RNase III catalytic domain-like (From Topology) | T: RNase III catalytic domain-like | F: Ribonucleas_3_3 | ECOD (1.6) |
| RA [auth c] | dsrm | e7l20c1 | A: a+b two layers | X: dsRBD-like | H: dsRNA-binding domain-like (From Topology) | T: dsRNA-binding domain-like | F: dsrm | ECOD (1.6) |
| QA [auth a] | MRP-S32 | e7l20a1 | A: extended segments | X: Mitoribosomal protein mL42 (From Topology) | H: Mitoribosomal protein mL42 (From Topology) | T: Mitoribosomal protein mL42 | F: MRP-S32 | ECOD (1.6) |
| PA [auth 9] | MRP-L27 | e7l2091 | A: extended segments | X: Mitochondrial 54S ribosomal protein L27 (From Topology) | H: Mitochondrial 54S ribosomal protein L27 (From Topology) | T: Mitochondrial 54S ribosomal protein L27 | F: MRP-L27 | ECOD (1.6) |
| OA [auth 7] | TGS | e7l2071 | A: a+b two layers | X: beta-Grasp | H: Ubiquitin-related | T: Ubiquitin-like | F: TGS | ECOD (1.6) |
| OA [auth 7] | tRNA_SAD | e7l2072 | A: a+b two layers | X: LuxS, MPP, ThrRS/AlaRS common domain | H: LuxS, MPP, ThrRS/AlaRS common domain | T: ThrRS/AlaRS editing domain | F: tRNA_SAD | ECOD (1.6) |
| NA [auth 6] | PBP | e7l2061 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: PEBP-like | F: PBP | ECOD (1.6) |
| D [auth F] | Ribosomal_L4 | e7l20F1 | A: a/b three-layered sandwiches | X: Ribosomal protein L4 (From Topology) | H: Ribosomal protein L4 (From Topology) | T: Ribosomal protein L4 | F: Ribosomal_L4 | ECOD (1.6) |
| MA [auth 5] | PDCD9 | e7l2051 | A: a/b three-layered sandwiches | X: Restriction endonuclease-like | H: Restriction endonuclease-like (From Topology) | T: Restriction endonuclease-like | F: PDCD9 | ECOD (1.6) |
| LA [auth E] | Ribosomal_L3 | e7l20E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: Alanine racemase-C | F: Ribosomal_L3 | ECOD (1.6) |
| KA [auth V] | ribosomal_L24_1 | e7l20V1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: ribosomal_L24_1 | ECOD (1.6) |
| JA [auth U] | Ribosomal_L23_2 | e7l20U1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal proteins S24e, L23 and L15e (From Topology) | T: Ribosomal proteins S24e, L23 and L15e | F: Ribosomal_L23_2 | ECOD (1.6) |
| IA [auth P] | Ribosomal_L18p | e7l20P1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ribosomal_L18p | ECOD (1.6) |
| HA [auth N] | Ribosomal_L16 | e7l20N1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal protein L10e | F: Ribosomal_L16 | ECOD (1.6) |
| GA [auth I] | Ribosomal_L10 | e7l20I1 | A: a+b two layers | X: Alpha-beta plaits | H: Ribosomal protein L10-like (From Topology) | T: Ribosomal protein L10-like | F: Ribosomal_L10 | ECOD (1.6) |
| FA [auth J] | Ribosomal_L11 | e7l20J2 | A: alpha arrays | X: HTH | H: HTH | T: Ribosomal protein L11, C-terminal domain | F: Ribosomal_L11 | ECOD (1.6) |
| FA [auth J] | Ribosomal_L11_N | e7l20J1 | A: a+b two layers | X: Ribosomal protein L11/L12e N-terminal domain-like | H: Ribosomal protein L11/L12e N-terminal domain (From Topology) | T: Ribosomal protein L11/L12e N-terminal domain | F: Ribosomal_L11_N | ECOD (1.6) |
| EA [auth r] | Ribosomal_S18 | e7l20r1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Ribosomal_S18 | ECOD (1.6) |
| C [auth D] | Ribosomal_L2 | e7l20D1 | A: beta barrels | X: OB-fold | H: Nucleic acid-binding proteins (From Topology) | T: Nucleic acid-binding proteins | F: Ribosomal_L2 | ECOD (1.6) |
| C [auth D] | Ribosomal_L2_C | e7l20D2 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: Ribosomal_L2_C | ECOD (1.6) |
| CA [auth o] | MRP-63 | e7l20o1 | A: extended segments | X: Mitoribosomal protein mL63 (From Topology) | H: Mitoribosomal protein mL63 (From Topology) | T: Mitoribosomal protein mL63 | F: MRP-63 | ECOD (1.6) |
| BA [auth m] | Mitoc_L55 | e7l20m1 | A: few secondary structure elements | X: Ribosomal protein L31p (From Topology) | H: Ribosomal protein L31p (From Topology) | T: Ribosomal protein L31p | F: Mitoc_L55 | ECOD (1.6) |
| AA [auth j] | EUF08791 | e7l20j1 | A: extended segments | X: Mitoribosomal protein mL52 (From Topology) | H: Mitoribosomal protein mL52 (From Topology) | T: Mitoribosomal protein mL52 | F: EUF08791 | ECOD (1.6) |
| Z [auth i] | MRP-L51 | e7l20i1 | A: alpha bundles | X: Long alpha-hairpin | H: Mitoribosomal protein mL51 (From Topology) | T: Mitoribosomal protein mL51 | F: MRP-L51 | ECOD (1.6) |
| Y [auth g] | Img2 | e7l20g1 | A: a+b two layers | X: Glucose permease domain IIB-like | H: eIF1-like (From Topology) | T: eIF1-like | F: Img2 | ECOD (1.6) |
| X [auth e] | MRP-L46 | e7l20e1 | A: a+b two layers | X: beta-Grasp | H: Nudix (From Topology) | T: Nudix | F: MRP-L46 | ECOD (1.6) |
| W [auth b] | L51_S25_CI-B8 | e7l20b1 | A: a+b three layers | X: Thioredoxin-like | H: Thioredoxin-like (From Topology) | T: Thioredoxin-like | F: L51_S25_CI-B8 | ECOD (1.6) |
| V [auth 8] | MRP-L28 | e7l2081 | A: extended segments | X: Mitochondrial 54S ribosomal protein L28 (From Topology) | H: Mitochondrial 54S ribosomal protein L28 (From Topology) | T: Mitochondrial 54S ribosomal protein L28 | F: MRP-L28 | ECOD (1.6) |
| U [auth 4] | Ribosomal_L36 | e7l2041 | A: few secondary structure elements | X: Ribosomal protein L36 (From Topology) | H: Ribosomal protein L36 (From Topology) | T: Ribosomal protein L36 | F: Ribosomal_L36 | ECOD (1.6) |
| T [auth 3] | Ribosomal_L35p | e7l2031 | A: a+b two layers | X: Ribosomal protein L35p (From Topology) | H: Ribosomal protein L35p (From Topology) | T: Ribosomal protein L35p | F: Ribosomal_L35p | ECOD (1.6) |
| S [auth 2] | Ribosomal_L34 | e7l2021 | A: extended segments | X: 50S ribosomal protein L34 (From Topology) | H: 50S ribosomal protein L34 (From Topology) | T: 50S ribosomal protein L34 | F: Ribosomal_L34 | ECOD (1.6) |
| R [auth 1] | Ribosomal_L33 | e7l2011 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: Ribosomal_L33 | ECOD (1.6) |
| Q [auth 0] | KOG4080 | e7l2001 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Rubredoxin-related | F: KOG4080 | ECOD (1.6) |
| P [auth Z] | Ribosomal_L30 | e7l20Z1 | A: a+b two layers | X: Ribosomal protein L30p/L7e (From Topology) | H: Ribosomal protein L30p/L7e (From Topology) | T: Ribosomal protein L30p/L7e | F: Ribosomal_L30 | ECOD (1.6) |
| O [auth Y] | MRP-L47 | e7l20Y1 | A: alpha bundles | X: Long alpha-hairpin | H: Ribosomal protein L29 (L29p) (From Topology) | T: Ribosomal protein L29 (L29p) | F: MRP-L47 | ECOD (1.6) |
| N [auth X] | Ribosomal_L28_1 | e7l20X1 | A: few secondary structure elements | X: Ribosomal protein bL28-related (From Homology) | H: Ribosomal protein bL28-related | T: Ribosomal protein L28 | F: Ribosomal_L28_1 | ECOD (1.6) |
| M [auth W] | Ribosomal_L27 | e7l20W1 | A: a+b complex topology | X: alpha/beta-Hammerhead/Barrel-sandwich hybrid | H: alpha/beta-Hammerhead/Barrel-sandwich hybrid | T: Ribosomal L27 protein | F: Ribosomal_L27 | ECOD (1.6) |
| L [auth T] | Ribosomal_L22 | e7l20T1 | A: a+b two layers | X: Enolase-N/ribosomal protein | H: Ribosomal protein L22 (From Topology) | T: Ribosomal protein L22 | F: Ribosomal_L22 | ECOD (1.6) |
| K [auth S] | Ribosomal_L21p | e7l20S1 | A: beta barrels | X: Ribosomal protein L21p (From Topology) | H: Ribosomal protein L21p (From Topology) | T: Ribosomal protein L21p | F: Ribosomal_L21p | ECOD (1.6) |
| J [auth R] | Ribosomal_L20 | e7l20R1 | A: alpha arrays | X: PABP domain-like | H: Ribosomal protein L20 (From Topology) | T: Ribosomal protein L20 | F: Ribosomal_L20 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| I [auth O] | PF14978 | Mitochondrial ribosome protein 63 (MRP-63) | Mitochondrial ribosome protein 63 | - | Family |
| I [auth O] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| H [auth M] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |
| G [auth L] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| F [auth K] | PF10780 | 39S ribosomal protein L53/MRP-L53 (MRP_L53) | 39S ribosomal protein L53/MRP-L53 | - | Family |
| F [auth K] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| BB [auth TA], CB [auth TB], DB [auth TC] | PF16320 | Ribosomal protein L7/L12 dimerisation domain (Ribosomal_L12_N) | Ribosomal protein L7/L12 dimerisation domain | This is the N-terminal dimerisation domain of ribosomal protein L7/L12 [1]. | Domain |
| BB [auth TA], CB [auth TB], DB [auth TC] | PF00542 | Ribosomal protein L7/L12 C-terminal domain (Ribosomal_L12) | Ribosomal protein L7/L12 C-terminal domain | Domain | |
| ZA [auth Q] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| E [auth H] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| E [auth H] | PF10501 | Ribosomal subunit 39S (Ribosomal_L50) | Ribosomal subunit 39S | The 39S ribosomal protein appears to be a subunit of one of the larger mitochondrial 66S or 70S units [1]. Under conditions of ethanol-stress in rats the larger subunit is largely dissociated into its smaller components [2]. In E. coli, in the absenc ... | Domain |
| NA [auth 6] | PF01161 | Phosphatidylethanolamine-binding protein (PBP) | Phosphatidylethanolamine-binding protein | Domain | |
| D [auth F] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| D [auth F] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| MA [auth 5] | PF07147 | Mitochondrial 28S ribosomal protein S30 (PDCD9) (PDCD9) | Mitochondrial 28S ribosomal protein S30 (PDCD9) | - | Family |
| LA [auth E] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| LA [auth E] | PF11788 | 39S mitochondrial ribosomal protein L46 (MRP-L46) | 39S mitochondrial ribosomal protein L46 | - | Family |
| KA [auth V] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| KA [auth V] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| JA [auth U] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| IA [auth P] | PF00472 | RF-1 domain (RF-1) | RF-1 domain | This domain is found in peptide chain release factors such as RF-1 (Swiss:P07011) and RF-2 (Swiss:P07012), and a number of smaller proteins of unknown function such as Swiss:P40711. This domain contains the peptidyl-tRNA hydrolase activity. The domai ... | Domain |
| IA [auth P] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
| HA [auth N] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| GA [auth I] | PF10244 | Mitochondrial ribosomal subunit (MRP-L51) | Mitochondrial ribosomal subunit | - | Family |
| GA [auth I] | PF00466 | Ribosomal protein L10 (Ribosomal_L10) | Ribosomal protein L10 | - | Family |
| FA [auth J] | PF03946 | Ribosomal protein L11, N-terminal domain (Ribosomal_L11_N) | Ribosomal protein L11, N-terminal domain | The N-terminal domain of Ribosomal protein L11 adopts an alpha/beta fold and is followed by the RNA binding C-terminal domain. | Domain |
| FA [auth J] | PF00298 | Ribosomal protein L11, RNA binding domain (Ribosomal_L11) | Ribosomal protein L11, RNA binding domain | Domain | |
| FA [auth J] | PF18699 | Mitoribosomal protein mL52 (MRPL52) | Mitoribosomal protein mL52 | - | Family |
| C [auth D] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| C [auth D] | PF04280 | Tim44-like domain (Tim44) | Tim44-like domain | Tim44 is an essential component of the machinery that mediates the translocation of nuclear-encoded proteins across the mitochondrial inner membrane [1]. Tim44 is thought to bind phospholipids of the mitochondrial inner membrane both by electrostati ... | Domain |
| C [auth D] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| U [auth 4] | PF00444 | Ribosomal protein L36 (Ribosomal_L36) | Ribosomal protein L36 | Domain | |
| T [auth 3] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| S [auth 2] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| Q [auth 0] | PF01783 | Ribosomal L32p protein family (Ribosomal_L32p) | Ribosomal L32p protein family | - | Family |
| P [auth Z] | PF00327 | Ribosomal protein L30p/L7e (Ribosomal_L30) | Ribosomal protein L30p/L7e | This family includes prokaryotic L30 and eukaryotic L7. | Domain |
| P [auth Z] | PF01765 | Ribosome recycling factor (RRF) | Ribosome recycling factor | The ribosome recycling factor (RRF / ribosome release factor) dissociates the ribosome from the mRNA after termination of translation, and is essential bacterial growth [1]. Thus ribosomes are "recycled" and ready for another round of protein synthe ... | Domain |
| O [auth Y] | PF06984 | Mitochondrial 39-S ribosomal protein L47 (MRP-L47) (MRP-L47) | Mitochondrial 39-S ribosomal protein L47 (MRP-L47) | - | Family |
| N [auth X] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| M [auth W] | PF00009 | Elongation factor Tu GTP binding domain (GTP_EFTU) | Elongation factor Tu GTP binding domain | This domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains. | Domain |
| L [auth T] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| K [auth S] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| J [auth R] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| J [auth R] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |














