7KZV

Structure of the human fanconi anaemia Core-UBE2T-ID-DNA complex in closed state

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth E]	SCOP2B Superfamily	ARM repeat-like	8102755	3000116	SCOP2B (2022-06-29)
E [auth F]	SCOP2B Superfamily	MgtE/FliG domain-like	8092488	3000127	SCOP2B (2022-06-29)
H [auth L]	SCOP2B Superfamily	UBC-like	8053875	3000570	SCOP2B (2022-06-29)
H [auth L]	SCOP2B Superfamily	RING/U-box like	8095995	3000160	SCOP2B (2022-06-29)
H [auth L]	SCOP2B Superfamily	UBC-like	8053874	3000570	SCOP2B (2022-06-29)
N [auth M]	SCOP2B Superfamily	UBC-like	8053875	3000570	SCOP2B (2022-06-29)
N [auth M]	SCOP2B Superfamily	UBC-like	8053874	3000570	SCOP2B (2022-06-29)
N [auth M]	SCOP2B Superfamily	RING/U-box like	8095995	3000160	SCOP2B (2022-06-29)
O [auth X]	SCOP2B Superfamily	UBC-like	8034448	3000570	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H [auth L]	PF09765	e7kzvL3	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: PF09765	ECOD (1.6)
H [auth L]	PF18890	e7kzvL2	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: PF18890	ECOD (1.6)
H [auth L]	PF18891	e7kzvL1	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: PF18891	ECOD (1.6)
H [auth L]	PF11793	e7kzvL4	A: few secondary structure elements	X: RING/U-box-like	H: RING/U-box-like	T: RING/U-box	F: PF11793	ECOD (1.6)
N [auth M]	PF09765	e7kzvM3	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: PF09765	ECOD (1.6)
N [auth M]	PF18890	e7kzvM2	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: PF18890	ECOD (1.6)
N [auth M]	PF18891	e7kzvM1	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: PF18891	ECOD (1.6)
N [auth M]	PF11793	e7kzvM4	A: few secondary structure elements	X: RING/U-box-like	H: RING/U-box-like	T: RING/U-box	F: PF11793	ECOD (1.6)
O [auth X]	PF00179	e7kzvX1	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: PF00179	ECOD (1.6)
P [auth U]	PF14674,PF14675,PF14676,PF14677,PF14678,PF14679,PF14680	e7kzvU1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF14674,PF14675,PF14676,PF14677,PF14678,PF14679,PF14680	ECOD (1.6)
Q [auth V]	PF14631	e7kzvV1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: PF14631	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, L [auth S]	PF15865	Fanconi anaemia group A protein N terminus (Fanconi_A_N)	Fanconi anaemia group A protein N terminus	-	Family
A, L [auth S]	PF03511	Fanconi anaemia group A protein (Fanconi_A)	Fanconi anaemia group A protein	-	Family
C	PF02106	Fanconi anaemia group C protein (Fanconi_C)	Fanconi anaemia group C protein	-	Family
E [auth F]	PF11107	Fanconi anemia group F protein (FANCF) (FANCF)	Fanconi anemia group F protein (FANCF)	-	Repeat
H [auth L], N [auth M]	PF18890	FANCL UBC-like domain 2 (FANCL_d2)	FANCL UBC-like domain 2	This entry represents the second of three UBC-like domain found in the FANCL protein, which is the catalytic E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia). Eight subunits of the Fanconi anaemia gene products form a multisubunit nucl ...	This entry represents the second of three UBC-like domain found in the FANCL protein, which is the catalytic E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia). Eight subunits of the Fanconi anaemia gene products form a multisubunit nuclear complex which is required for mono-ubiquitination of a downstream FA protein, FANCD2.	Domain
H [auth L], N [auth M]	PF18891	FANCL UBC-like domain 3 (FANCL_d3)	FANCL UBC-like domain 3	This entry represents the third of three UBC-like domain found in the FANCL protein, which is the catalytic E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia). Eight subunits of the Fanconi anaemia gene products form a multisubunit nucle ...	This entry represents the third of three UBC-like domain found in the FANCL protein, which is the catalytic E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia). Eight subunits of the Fanconi anaemia gene products form a multisubunit nuclear complex which is required for mono-ubiquitination of a downstream FA protein, FANCD2.	Domain
H [auth L], N [auth M]	PF09765	FANCL UBC-like domain 1 (FANCL_d1)	FANCL UBC-like domain 1	This entry represents the first of three UBC-like domain found in the FANCL protein, which is the catalytic E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia). Eight subunits of the Fanconi anaemia gene products form a multisubunit nucle ...	This entry represents the first of three UBC-like domain found in the FANCL protein, which is the catalytic E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia). Eight subunits of the Fanconi anaemia gene products form a multisubunit nuclear complex which is required for mono-ubiquitination of a downstream FA protein, FANCD2.	Domain
H [auth L], N [auth M]	PF11793	FANCL C-terminal domain (FANCL_C)	FANCL C-terminal domain	This domain is found at the C-terminus of the Fancl protein in humans which is the E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia) that mediates monoubiquitination of FANCD2. This entry represents the RING domain which recruits the UB ...	This domain is found at the C-terminus of the Fancl protein in humans which is the E3 ubiquitin ligase subunit of the FA complex (Fanconi anaemia) that mediates monoubiquitination of FANCD2. This entry represents the RING domain which recruits the UBE2T ubiquitin conjugating E2 enzyme as other RING E3s [2,3].	Domain
J [auth P], K [auth Q]	PF15146	Fanconi anemia-associated (FANCAA)	Fanconi anemia-associated	-	Family
O [auth X]	PF00179	Ubiquitin-conjugating enzyme (UQ_con)	Ubiquitin-conjugating enzyme	Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...	Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].	Domain
P [auth U]	PF14674	FANCI solenoid 1 cap (FANCI_S1-cap)	FANCI solenoid 1 cap	-	Repeat
P [auth U]	PF14675	FANCI solenoid 1 (FANCI_S1)	FANCI solenoid 1	-	Repeat
P [auth U]	PF14676	FANCI solenoid 2 (FANCI_S2)	FANCI solenoid 2	-	Repeat
P [auth U]	PF14677	FANCI solenoid 3 (FANCI_S3)	FANCI solenoid 3	-	Repeat
P [auth U]	PF14678	FANCI solenoid 4 (FANCI_S4)	FANCI solenoid 4	-	Repeat
P [auth U]	PF14679	FANCI helical domain 1 (FANCI_HD1)	FANCI helical domain 1	-	Repeat
Q [auth V]	PF14631	Fanconi anaemia protein FancD2 nuclease (FancD2)	Fanconi anaemia protein FancD2 nuclease	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, L [auth S]	Fanconi anemia group A protein	-	developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development developmental process multicellular organismal process gonad development reproductive system development reproductive process sex differentiation animal organ development developmental process involved in reproduction male gonad development male sex differentiation multicellular organism development development of primary male sexual characteristics development of primary sexual characteristics anatomical structure development reproductive structure development system development cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis regulation of defense response regulation of biological process response to stimulus regulation of response to external stimulus defense response biological regulation regulation of inflammatory response response to external stimulus regulation of response to stimulus response to stress regulation of response to stress inflammatory response regulation of leukocyte differentiation regulation of cellular process cellular developmental process regulation of developmental process regulation of leukocyte activation cell development regulation of cell activation mononuclear cell differentiation regulation of cell differentiation lymphocyte activation lymphocyte differentiation regulation of cell development leukocyte activation regulation of T cell differentiation T cell activation cell differentiation T cell differentiation regulation of immune system process regulation of multicellular organismal process regulation of lymphocyte differentiation regulation of multicellular organismal development hemopoiesis regulation of regulatory T cell differentiation cell activation regulation of T cell activation immune system process regulatory T cell differentiation regulation of hemopoiesis leukocyte differentiation regulation of lymphocyte activation cellular response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response metabolic process macromolecule metabolic process DNA repair regulation of signaling cell surface receptor signaling pathway signaling regulation of signal transduction cell communication regulation of CD40 signaling pathway regulation of cell communication CD40 signaling pathway signal transduction cell population proliferation sexual reproduction multicellular organismal reproductive process gamete generation germ cell proliferation regulation of germ cell proliferation regulation of cell population proliferation interstrand cross-link repair organelle fission meiotic cell cycle male meiotic nuclear division meiotic cell cycle process male gamete generation nuclear division organelle organization meiotic nuclear division cell cycle cell cycle process female gonad development female sex differentiation development of primary female sexual characteristics	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle
B, I [auth O]	Fanconi anemia group B protein	-	cellular response to stimulus regulation of DNA recombination regulation of cellular process response to stimulus regulation of double-strand break repair regulation of cellular response to stress negative regulation of biological process regulation of primary metabolic process negative regulation of DNA repair nucleobase-containing compound metabolic process organic substance metabolic process cellular response to stress response to stress regulation of response to stress negative regulation of double-strand break repair cellular response to stimulus regulation of DNA recombination regulation of cellular process response to stimulus regulation of double-strand break repair regulation of cellular response to stress negative regulation of biological process regulation of primary metabolic process negative regulation of DNA repair nucleobase-containing compound metabolic process organic substance metabolic process cellular response to stress response to stress regulation of response to stress negative regulation of double-strand break repair negative regulation of cellular process negative regulation of nucleobase-containing compound metabolic process recombinational repair regulation of nucleobase-containing compound metabolic process negative regulation of double-strand break repair via homologous recombination double-strand break repair via homologous recombination DNA repair negative regulation of macromolecule metabolic process double-strand break repair regulation of biological process negative regulation of response to stimulus negative regulation of metabolic process DNA recombination biological regulation primary metabolic process DNA metabolic process regulation of macromolecule metabolic process nucleic acid metabolic process regulation of DNA repair regulation of double-strand break repair via homologous recombination negative regulation of DNA recombination organic cyclic compound metabolic process DNA damage response regulation of response to stimulus metabolic process cellular process negative regulation of DNA metabolic process macromolecule metabolic process regulation of metabolic process regulation of DNA metabolic process positive regulation of biological process positive regulation of double-strand break repair via homologous recombination positive regulation of response to stimulus positive regulation of metabolic process positive regulation of DNA repair positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of DNA recombination positive regulation of nucleobase-containing compound metabolic process positive regulation of double-strand break repair positive regulation of DNA metabolic process replication-born double-strand break repair via sister chromatid exchange interstrand cross-link repair	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle
C	Fanconi anemia group C protein	-	cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis multicellular organismal process multicellular organismal-level homeostasis homeostatic process immune system process homeostasis of number of cells myeloid cell homeostasis cellular response to stimulus cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular process cellular component organization or biogenesis multicellular organismal process multicellular organismal-level homeostasis homeostatic process immune system process homeostasis of number of cells myeloid cell homeostasis cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process macromolecule metabolic process DNA repair cellular response to oxidative stress detoxification reactive oxygen species metabolic process cellular response to chemical stress response to superoxide cellular oxidant detoxification response to inorganic substance cellular response to oxygen radical cellular response to reactive oxygen species cellular detoxification cellular metabolic process response to oxygen-containing compound cellular response to oxygen-containing compound response to reactive oxygen species response to toxic substance removal of superoxide radicals superoxide metabolic process response to oxidative stress cellular response to chemical stimulus response to chemical cellular response to superoxide cellular response to toxic substance response to oxygen radical developmental process sexual reproduction cellular developmental process reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation cell differentiation anatomical structure development germ cell development head development brain morphogenesis animal organ development brain development nervous system development multicellular organism development anatomical structure morphogenesis central nervous system development animal organ morphogenesis system development nucleotide-excision repair interstrand cross-link repair neuronal stem cell population maintenance maintenance of cell number stem cell population maintenance	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle
D [auth E]	Fanconi anemia group E protein	-	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process interstrand cross-link repair cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process interstrand cross-link repair macromolecule metabolic process DNA repair	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular non-membrane-bounded organelle chromosome intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle intracellular non-membrane-bounded organelle chromosome non-membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-DNA complex chromatin centrosome microtubule organizing center cytoskeleton microtubule cytoskeleton
E [auth F]	Fanconi anemia group F protein	-	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process metabolic process interstrand cross-link repair cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process metabolic process interstrand cross-link repair macromolecule metabolic process DNA repair	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle
F [auth G], G [auth H]	Fanconi anemia group G protein	DNA binding binding organic cyclic compound binding damaged DNA binding nucleic acid binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process developmental process spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis reproductive process multicellular organismal reproductive process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process developmental process spermatid development spermatid differentiation sexual reproduction cellular developmental process spermatogenesis reproductive process multicellular organismal reproductive process cell development cellular process involved in reproduction in multicellular organism developmental process involved in reproduction gamete generation male gamete generation cell differentiation anatomical structure development germ cell development multicellular organismal process gonad development reproductive system development female gonad development sex differentiation animal organ development female sex differentiation development of primary female sexual characteristics multicellular organism development development of primary sexual characteristics reproductive structure development ovarian follicle development system development primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process metabolic process macromolecule metabolic process DNA repair response to radiation response to abiotic stimulus interstrand cross-link repair cellular component organization organelle organization cellular component organization or biogenesis mitochondrion organization	membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen intracellular non-membrane-bounded organelle membrane-bounded organelle intracellular organelle intracellular anatomical structure mitochondrion organelle cytoplasm cellular anatomical entity intracellular membrane-bounded organelle nucleus membrane-enclosed lumen nucleolus intracellular organelle lumen organelle lumen intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle cytosol Fanconi anaemia nuclear complex protein-containing complex nuclear protein-containing complex cell periphery plasma membrane membrane nucleoplasm protein-DNA complex chromatin chromosome
H [auth L], N [auth M]	E3 ubiquitin-protein ligase FANCL	aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity ubiquitin protein ligase binding protein binding binding ubiquitin-like protein ligase binding enzyme binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity transferase activity catalytic activity ubiquitin-protein transferase activity ubiquitin protein ligase binding protein binding binding ubiquitin-like protein ligase binding enzyme binding cation binding ion binding metal ion binding small molecule binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process sexual reproduction reproductive process multicellular organismal reproductive process gamete generation primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process sexual reproduction reproductive process multicellular organismal reproductive process gamete generation primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process metabolic process interstrand cross-link repair macromolecule metabolic process DNA repair regulation of biological process cell population proliferation regulation of cellular process regulation of cell population proliferation biological regulation organonitrogen compound metabolic process protein monoubiquitination protein ubiquitination macromolecule modification protein metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal	membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen membrane-bounded organelle intracellular organelle organelle envelope intracellular anatomical structure organelle nuclear envelope nucleus cellular anatomical entity intracellular membrane-bounded organelle endomembrane system cytoplasm cytosol membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-containing complex protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle Fanconi anaemia nuclear complex nuclear protein-containing complex nuclear body
J [auth P], K [auth Q]	Fanconi anemia core complex-associated protein 100	DNA binding binding organic cyclic compound binding nucleic acid binding	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process interstrand cross-link repair cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process interstrand cross-link repair macromolecule metabolic process DNA repair	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen intracellular anatomical structure cytoplasm cellular anatomical entity cytosol membrane-bounded organelle Fanconi anaemia nuclear complex intracellular organelle protein-containing complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen protein-DNA complex intracellular non-membrane-bounded organelle chromatin chromosome non-membrane-bounded organelle
M [auth W]	Fanconi anemia core complex-associated protein 20	-	-	-
O [auth X]	Ubiquitin-conjugating enzyme E2 T	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ubiquitin conjugating enzyme activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity ubiquitin-like protein conjugating enzyme activity transferase activity catalytic activity ubiquitin-protein transferase activity protein-containing complex binding chromatin binding ubiquitin protein ligase binding protein binding ubiquitin-like protein ligase binding enzyme binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process protein K6-linked ubiquitination organonitrogen compound metabolic process protein polyubiquitination primary metabolic process organic substance metabolic process protein ubiquitination macromolecule modification metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process protein K6-linked ubiquitination organonitrogen compound metabolic process protein polyubiquitination primary metabolic process organic substance metabolic process protein ubiquitination macromolecule modification metabolic process protein metabolic process macromolecule metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal protein K63-linked ubiquitination DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process DNA repair protein K27-linked ubiquitination protein K11-linked ubiquitination protein K48-linked ubiquitination protein K29-linked ubiquitination protein autoubiquitination protein monoubiquitination	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle nucleoplasm
P [auth U]	Fanconi anemia, complementation group I	-	cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process macromolecule metabolic process cellular response to stimulus response to stimulus primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response response to stress metabolic process cellular process macromolecule metabolic process DNA repair	-
Q [auth V]	Fanconi anemia group D2 protein	protein binding binding DNA polymerase binding enzyme binding	sexual reproduction reproductive process multicellular organismal reproductive process gamete generation regulation of defense response regulation of biological process response to stimulus regulation of response to external stimulus defense response biological regulation regulation of inflammatory response response to external stimulus regulation of response to stimulus response to stress sexual reproduction reproductive process multicellular organismal reproductive process gamete generation regulation of defense response regulation of biological process response to stimulus regulation of response to external stimulus defense response biological regulation regulation of inflammatory response response to external stimulus regulation of response to stimulus response to stress regulation of response to stress inflammatory response multicellular organismal process regulation of leukocyte differentiation regulation of cellular process cellular developmental process regulation of developmental process regulation of leukocyte activation cell development regulation of cell activation mononuclear cell differentiation regulation of cell differentiation lymphocyte activation lymphocyte differentiation regulation of cell development leukocyte activation regulation of T cell differentiation multicellular organism development T cell activation cell differentiation anatomical structure development T cell differentiation regulation of immune system process regulation of multicellular organismal process developmental process regulation of lymphocyte differentiation regulation of multicellular organismal development hemopoiesis regulation of regulatory T cell differentiation cell activation regulation of T cell activation immune system process regulatory T cell differentiation regulation of hemopoiesis cellular process leukocyte differentiation regulation of lymphocyte activation cellular response to stimulus regulation of signaling cell surface receptor signaling pathway signaling regulation of signal transduction cell communication regulation of CD40 signaling pathway regulation of cell communication CD40 signaling pathway signal transduction head development brain morphogenesis animal organ development brain development nervous system development anatomical structure morphogenesis central nervous system development animal organ morphogenesis system development response to ionizing radiation response to radiation response to abiotic stimulus response to gamma radiation primary metabolic process DNA metabolic process nucleic acid metabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process organic substance metabolic process cellular response to stress DNA damage response metabolic process interstrand cross-link repair macromolecule metabolic process DNA repair DNA damage checkpoint signaling regulation of cell cycle phase transition negative regulation of biological process negative regulation of cell cycle cell cycle phase transition intracellular signal transduction mitotic cell cycle negative regulation of mitotic cell cycle regulation of mitotic cell cycle mitotic DNA integrity checkpoint signaling mitotic DNA damage checkpoint signaling negative regulation of cellular process negative regulation of cell cycle phase transition cell cycle mitotic intra-S DNA damage checkpoint signaling regulation of cell cycle cell cycle process regulation of cell cycle process DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling mitotic cell cycle checkpoint signaling mitotic cell cycle process signal transduction in response to DNA damage meiotic chromosome segregation meiotic cell cycle organelle fission chromosome organization meiotic cell cycle process cellular component organization chromosome organization involved in meiotic cell cycle nuclear division organelle organization meiosis I meiosis I cell cycle process homologous chromosome pairing at meiosis nuclear chromosome segregation meiotic nuclear division homologous chromosome segregation cellular component organization or biogenesis chromosome segregation homologous recombination reciprocal homologous recombination double-strand break repair DNA recombination reciprocal meiotic recombination double-strand break repair involved in meiotic recombination response to oxidative stress cellular response to chemical stimulus response to chemical cellular response to oxidative stress cellular response to chemical stress neuronal stem cell population maintenance maintenance of cell number stem cell population maintenance	membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle membrane-bounded organelle intracellular anatomical structure nucleus membrane-enclosed lumen intracellular membrane-bounded organelle cellular anatomical entity nucleolus intracellular organelle lumen intracellular organelle organelle lumen organelle intracellular non-membrane-bounded organelle nuclear lumen non-membrane-bounded organelle chromosome condensed chromosome protein-containing complex catalytic complex DNA repair complex cytoplasm cytosol nuclear body nucleoplasm protein-DNA complex chromatin
S [auth Z]	DNA (29-MER)	-	-	-
R [auth Y]	DNA (29-MER)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, L [auth S]	IPR031729	Fanconi anaemia group A protein, N-terminal domain	Domain
A, L [auth S]	IPR003516	Fanconi anaemia group A protein	Family
B, I [auth O]	IPR033333	Fanconi anemia group B protein	Family
C	IPR000686	Fanconi anaemia group C protein	Family
D [auth E]	IPR039685	Fanconi anemia group E protein	Family
D [auth E]	IPR021025	Fanconi Anaemia group E protein, C-terminal	Domain
E [auth F]	IPR035428	Fanconi anemia group F protein	Family
E [auth F]	IPR038505	FANCF, C-terminal domain superfamily	Homologous Superfamily
F [auth G], G [auth H]	IPR011990	Tetratricopeptide-like helical domain superfamily	Homologous Superfamily
F [auth G], G [auth H]	IPR019734	Tetratricopeptide repeat	Repeat
F [auth G], G [auth H]	IPR039684	Fanconi anemia group G protein	Family
H [auth L], N [auth M]	IPR016135	Ubiquitin-conjugating enzyme/RWD-like	Homologous Superfamily
H [auth L], N [auth M]	IPR019162	Fanconi anemia complex, subunit FancL, WD-repeat containing domain	Domain
H [auth L], N [auth M]	IPR026848	E3 ubiquitin-protein ligase FANCL	Family
H [auth L], N [auth M]	IPR044037	FANCL, UBC-like domain 3	Domain
H [auth L], N [auth M]	IPR043003	FANCL, UBC-like domain 3 superfamily	Homologous Superfamily
H [auth L], N [auth M]	IPR026850	FANCL C-terminal domain	Domain
H [auth L], N [auth M]	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
H [auth L], N [auth M]	IPR043898	FANCL, UBC-like domain 2	Domain
J [auth P], K [auth Q]	IPR029251	Fanconi anemia-associated protein of 100kDa	Family
O [auth X]	IPR000608	Ubiquitin-conjugating enzyme E2	Domain
O [auth X]	IPR016135	Ubiquitin-conjugating enzyme/RWD-like	Homologous Superfamily
O [auth X]	IPR023313	Ubiquitin-conjugating enzyme, active site	Active Site
P [auth U]	IPR029313	FANCI solenoid 3 domain	Domain
P [auth U]	IPR029305	FANCI solenoid 1 cap	Domain
P [auth U]	IPR029310	FANCI helical domain 1	Domain
P [auth U]	IPR029315	FANCI solenoid 2 domain	Domain
P [auth U]	IPR029314	FANCI solenoid 4 domain	Domain
P [auth U]	IPR029312	FANCI helical domain 2	Domain
P [auth U]	IPR026171	Fanconi anemia group I protein	Family
P [auth U]	IPR029308	FANCI solenoid 1 domain	Domain
Q [auth V]	IPR029448	Fanconi anaemia protein FANCD2	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, L [auth S]	Pharos: O15360	Fanconi anemia hyperinsulinism urinary bladder cancer Fanconi anemia complementation group A adenoid cystic carcinoma salivary gland adenoid cystic carcinoma vitiligo glioblastoma large cell medulloblastoma lung cancer Malignant neoplasm of salivary gland acute myeloid leukemia neuroblastoma aplastic anemia ovarian cancer Fanconi anemia hyperinsulinism urinary bladder cancer Fanconi anemia complementation group A adenoid cystic carcinoma salivary gland adenoid cystic carcinoma vitiligo glioblastoma large cell medulloblastoma lung cancer Malignant neoplasm of salivary gland acute myeloid leukemia neuroblastoma aplastic anemia ovarian cancer cancer primitive neuroectodermal tumor cutaneous melanoma X-linked mixed deafness with perilymphatic gusher head and neck cancer inherited aplastic anemia leukemia malignant glioma medulloblastoma neurofibromatosis type 1 atypical teratoid rhabdoid tumor photosensitivity disease prostate adenocarcinoma esophageal atresia/tracheoesophageal fistula skin basal cell carcinoma urinary bladder neoplasm hematopoietic and lymphoid system neoplasm intellectual disability lung adenocarcinoma malignant mesothelioma melanoma anemia osteosarcoma breast cancer congenital anemia psoriasis salivary gland cancer squamous cell carcinoma
B, I [auth O]	Pharos: Q8NB91	Fanconi anemia Fanconi anemia complementation group B VACTERL with hydrocephalus Vater Association With Hydrocephalus aplastic anemia Fanconi anemia complementation group A hematopoietic and lymphoid system neoplasm intellectual disability VACTERL association, X-linked, with or without hydrocephalus congenital anemia esophageal atresia/tracheoesophageal fistula hydrocephalus neurofibromatosis type 1 head and neck cancer inherited aplastic anemia Fanconi anemia Fanconi anemia complementation group B VACTERL with hydrocephalus Vater Association With Hydrocephalus aplastic anemia Fanconi anemia complementation group A hematopoietic and lymphoid system neoplasm intellectual disability VACTERL association, X-linked, with or without hydrocephalus congenital anemia esophageal atresia/tracheoesophageal fistula hydrocephalus neurofibromatosis type 1 head and neck cancer inherited aplastic anemia osteosarcoma
C	Pharos: Q00597	Fanconi anemia Fanconi anemia complementation group C hyperinsulinism large cell medulloblastoma medulloblastoma Primary microcephaly urinary bladder carcinoma acute myeloid leukemia bladder benign neoplasm cleft lip head and neck cancer inherited aplastic anemia leukemia urinary bladder neoplasm anemia Fanconi anemia Fanconi anemia complementation group C hyperinsulinism large cell medulloblastoma medulloblastoma Primary microcephaly urinary bladder carcinoma acute myeloid leukemia bladder benign neoplasm cleft lip head and neck cancer inherited aplastic anemia leukemia urinary bladder neoplasm anemia bladder carcinoma in situ endogenous depression esophageal atresia/tracheoesophageal fistula Fanconi anemia complementation group A hematopoietic and lymphoid system neoplasm intellectual disability malignant mesothelioma neurofibromatosis type 1 urinary bladder cancer aplastic anemia cancer congenital anemia
D [auth E]	Pharos: Q9HB96	Fanconi anemia Fanconi anemia complementation group E primitive neuroectodermal tumor acute myeloid leukemia Cytopenia head and neck cancer intellectual disability medulloblastoma osteosarcoma psoriasis aplastic anemia Fanconi anemia complementation group A hematopoietic and lymphoid system neoplasm leukemia neurofibromatosis type 1 Fanconi anemia Fanconi anemia complementation group E primitive neuroectodermal tumor acute myeloid leukemia Cytopenia head and neck cancer intellectual disability medulloblastoma osteosarcoma psoriasis aplastic anemia Fanconi anemia complementation group A hematopoietic and lymphoid system neoplasm leukemia neurofibromatosis type 1 congenital anemia esophageal atresia/tracheoesophageal fistula inherited aplastic anemia malignant mesothelioma non-small cell lung carcinoma
E [auth F]	Pharos: Q9NPI8	Fanconi anemia Fanconi anemia complementation group F lung carcinoma neurofibromatosis type 1 primitive neuroectodermal tumor acute myeloid leukemia congenital anemia esophageal atresia/tracheoesophageal fistula head and neck cancer inherited aplastic anemia leukemia malignant ependymoma osteosarcoma Radial club hand aplastic anemia Fanconi anemia Fanconi anemia complementation group F lung carcinoma neurofibromatosis type 1 primitive neuroectodermal tumor acute myeloid leukemia congenital anemia esophageal atresia/tracheoesophageal fistula head and neck cancer inherited aplastic anemia leukemia malignant ependymoma osteosarcoma Radial club hand aplastic anemia hematopoietic and lymphoid system neoplasm intellectual disability lung cancer medulloblastoma rheumatoid arthritis atypical teratoid rhabdoid tumor Fanconi anemia complementation group A glioblastoma hepatocellular carcinoma large cell medulloblastoma
F [auth G], G [auth H]	Pharos: O15287	Fanconi anemia Fanconi anemia complementation group G mouth disease acute myeloid leukemia colorectal cancer Esophageal atresia with or without tracheoesophageal fistula Fanconi anemia complementation group A hematopoietic and lymphoid system neoplasm leukemia anemia congenital anemia esophageal atresia/tracheoesophageal fistula inherited aplastic anemia aplastic anemia head and neck cancer Fanconi anemia Fanconi anemia complementation group G mouth disease acute myeloid leukemia colorectal cancer Esophageal atresia with or without tracheoesophageal fistula Fanconi anemia complementation group A hematopoietic and lymphoid system neoplasm leukemia anemia congenital anemia esophageal atresia/tracheoesophageal fistula inherited aplastic anemia aplastic anemia head and neck cancer intellectual disability neurofibromatosis type 1
H [auth L], N [auth M]	Pharos: Q9NW38	Fanconi anemia Fanconi anemia complementation group L pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia progressive supranuclear palsy aplastic anemia Cytopenia hematopoietic and lymphoid system neoplasm medulloblastoma pancreatic intraductal papillary-mucinous carcinoma Pick disease attention deficit hyperactivity disorder, inattentive type dermatomyositis esophageal atresia/tracheoesophageal fistula inherited aplastic anemia neurofibromatosis type 1 Fanconi anemia Fanconi anemia complementation group L pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia progressive supranuclear palsy aplastic anemia Cytopenia hematopoietic and lymphoid system neoplasm medulloblastoma pancreatic intraductal papillary-mucinous carcinoma Pick disease attention deficit hyperactivity disorder, inattentive type dermatomyositis esophageal atresia/tracheoesophageal fistula inherited aplastic anemia neurofibromatosis type 1 pancreatic intraductal papillary-mucinous neoplasm congenital anemia endogenous depression head and neck cancer lung cancer ovarian cancer
J [auth P], K [auth Q]	Pharos: Q0VG06	age-related macular degeneration large cell medulloblastoma primitive neuroectodermal tumor atypical teratoid rhabdoid tumor medulloblastoma psoriasis corneal disease ovarian cancer wet macular degeneration
O [auth X]	Pharos: Q9NPD8	Fanconi anemia Fanconi anemia complementation group T large cell medulloblastoma malignant ependymoma medulloblastoma non-small cell lung carcinoma acne pancreatic intraductal papillary-mucinous carcinoma aplastic anemia pilocytic astrocytoma breast cancer psoriasis Cytopenia hepatocellular carcinoma kidney cancer Fanconi anemia Fanconi anemia complementation group T large cell medulloblastoma malignant ependymoma medulloblastoma non-small cell lung carcinoma acne pancreatic intraductal papillary-mucinous carcinoma aplastic anemia pilocytic astrocytoma breast cancer psoriasis Cytopenia hepatocellular carcinoma kidney cancer lung adenocarcinoma nasopharyngeal carcinoma oligodendroglioma adrenal cortex carcinoma pancreatic intraductal papillary-mucinous neoplasm astrocytic tumor pituitary cancer breast carcinoma ductal breast carcinoma in situ inherited aplastic anemia kidney neoplasm lung carcinoma malignant pancreatic neoplasm neurofibromatosis type 1 ovarian cancer Alzheimer disease Pick disease atopic eczema primitive neuroectodermal tumor congenital anemia endometriosis hematopoietic and lymphoid system neoplasm invasive ductal breast carcinoma
Q [auth V]	Pharos: Q9BXW9	Fanconi anemia Fanconi anemia complementation group D2 intellectual disability leukemia neurofibromatosis type 1 ovarian cancer acute myeloid leukemia pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia aplastic anemia psoriasis congenital anemia endometriosis glioblastoma hepatocellular carcinoma invasive ductal breast carcinoma Fanconi anemia Fanconi anemia complementation group D2 intellectual disability leukemia neurofibromatosis type 1 ovarian cancer acute myeloid leukemia pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia aplastic anemia psoriasis congenital anemia endometriosis glioblastoma hepatocellular carcinoma invasive ductal breast carcinoma malignant glioma non-small cell lung carcinoma pancreatic intraductal papillary-mucinous carcinoma adrenal cortex carcinoma Primary microcephaly atopic eczema Fanconi anemia complementation group A head and neck cancer inherited aplastic anemia large cell medulloblastoma medulloblastoma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm anemia primitive neuroectodermal tumor atypical teratoid rhabdoid tumor ductal breast carcinoma in situ esophageal atresia/tracheoesophageal fistula hematopoietic and lymphoid system neoplasm