7KYP

PsaBC from Streptococcus pneumoniae in complex with Fab

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Membrane Protein Annotation: OPM
Membrane Protein Annotation: PDBTM
Membrane Protein Annotation: MemProtMD

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF00005	e7kypA1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
C	PF00005	e7kypC1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
E	PF00005	e7kypE1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
G	PF00005	e7kypG1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
I	PF00005	e7kypI1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
K	PF00005	e7kypK1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
M	PF00005	e7kypM1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
O	PF00005	e7kypO1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: PF00005	ECOD (1.6)
B	PF00950	e7kypB1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)
D	PF00950	e7kypD1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)
F	PF00950	e7kypF1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)
H	PF00950	e7kypH1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)
J	PF00950	e7kypJ1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)
L	PF00950	e7kypL1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)
N	PF00950	e7kypN1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)
P	PF00950	e7kypP1	A: alpha bundles	X: Type II ABC importer transmembrane domain fold (From Topology)	H: Type II ABC importer transmembrane domain fold (From Topology)	T: Type II ABC importer transmembrane domain fold	F: PF00950	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, C, E, G, I A, C, E, G, I, K, M, O	PF00005	ABC transporter (ABC_tran)	ABC transporter	ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are comp ...	ABC transporters for a large family of proteins responsible for translocation of a variety of compounds across biological membranes. ABC transporters are the largest family of proteins in many completely sequenced bacteria. ABC transporters are composed of two copies of this domain and two copies of a transmembrane domain Pfam:PF00664. These four domains may belong to a single polypeptide as in Swiss:P13569, or belong in different polypeptide chains.	Domain
B, D, F, H, J B, D, F, H, J, L, N, P	PF00950	ABC 3 transport family (ABC-3)	ABC 3 transport family	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, C, E, G, I A, C, E, G, I, K, M, O	Manganese ABC transporter, ATP-binding protein	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity ATP-dependent activity transporter activity transmembrane transporter activity	-	-
B, D, F, H, J B, D, F, H, J, L, N, P	Manganese ABC transporter, permease protein	-	transmembrane transport localization transport cellular process establishment of localization	ATPase dependent transmembrane transport complex protein-containing complex plasma membrane protein complex membrane plasma membrane membrane protein complex cellular anatomical entity transporter complex ATP-binding cassette (ABC) transporter complex cell periphery transmembrane transporter complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, C, E, G, I A, C, E, G, I, K, M, O	IPR003593	AAA+ ATPase domain	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR017871	ABC transporter-like, conserved site	Conserved Site
A, C, E, G, I A, C, E, G, I, K, M, O	IPR003439	ABC transporter-like, ATP-binding domain	Domain
A, C, E, G, I A, C, E, G, I, K, M, O	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR037294	ABC transporter, BtuC-like	Homologous Superfamily
B, D, F, H, J B, D, F, H, J, L, N, P	IPR001626	ABC transporter, TroCD-like	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
B, D, F, H, J B, D, F, H, J, L, N, P	OPM	Transmembrane	Alpha-helical polytopic	ABC transporters	FecCD transport family

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
B, D, F, H, J B, D, F, H, J, L, N, P	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
B, D, F, H, J B, D, F, H, J, L, N, P	MemProtMD	Annotated as membrane protein by MemProtMD

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.