7K6V | pdb_00007k6v

Crystal Structure of Virus-like Particles of GII.4 Norovirus Houston virus (HOV)

External Resource: Annotation

Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth IB]	AAA_lid_RFC1	e7k6vIB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
Y [auth IA]	AAA_lid_RFC1	e7k6vIA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
X [auth HC]	AAA_lid_RFC1	e7k6vHC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
W [auth HB]	AAA_lid_RFC1	e7k6vHB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
V [auth HA]	AAA_lid_RFC1	e7k6vHA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
U [auth GC]	AAA_lid_RFC1	e7k6vGC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
T [auth GB]	AAA_lid_RFC1	e7k6vGB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
SA [auth OC]	AAA_lid_RFC1	e7k6vOC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
S [auth GA]	AAA_lid_RFC1	e7k6vGA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
RA [auth OB]	AAA_lid_RFC1	e7k6vOB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
R [auth FC]	AAA_lid_RFC1	e7k6vFC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
QA [auth OA]	AAA_lid_RFC1	e7k6vOA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
Q [auth FB]	AAA_lid_RFC1	e7k6vFB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
PA [auth NC]	AAA_lid_RFC1	e7k6vNC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
P [auth FA]	AAA_lid_RFC1	e7k6vFA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
OA [auth NB]	AAA_lid_RFC1	e7k6vNB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
O [auth EC]	AAA_lid_RFC1	e7k6vEC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
NA	AAA_lid_RFC1	e7k6vNA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
N [auth EB]	AAA_lid_RFC1	e7k6vEB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
MA [auth MC]	AAA_lid_RFC1	e7k6vMC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
M [auth EA]	AAA_lid_RFC1	e7k6vEA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
LA [auth MB]	AAA_lid_RFC1	e7k6vMB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
L [auth DC]	AAA_lid_RFC1	e7k6vDC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
KA [auth MA]	AAA_lid_RFC1	e7k6vMA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
K [auth DB]	AAA_lid_RFC1	e7k6vDB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
JA [auth LC]	AAA_lid_RFC1	e7k6vLC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
J [auth DA]	AAA_lid_RFC1	e7k6vDA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
IA [auth LB]	AAA_lid_RFC1	e7k6vLB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
I [auth CC]	AAA_lid_RFC1	e7k6vCC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
HA [auth LA]	AAA_lid_RFC1	e7k6vLA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
H [auth CB]	AAA_lid_RFC1	e7k6vCB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
GA [auth KC]	AAA_lid_RFC1	e7k6vKC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
G [auth CA]	AAA_lid_RFC1	e7k6vCA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
FA [auth KB]	AAA_lid_RFC1	e7k6vKB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
F [auth BC]	AAA_lid_RFC1	e7k6vBC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
EA [auth KA]	AAA_lid_RFC1	e7k6vKA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
E [auth BB]	AAA_lid_RFC1	e7k6vBB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
DA [auth JC]	AAA_lid_RFC1	e7k6vJC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
D [auth BA]	AAA_lid_RFC1	e7k6vBA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
CA [auth JB]	AAA_lid_RFC1	e7k6vJB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
C [auth AC]	AAA_lid_RFC1	e7k6vAC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
BA [auth JA]	AAA_lid_RFC1	e7k6vJA1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
B [auth AB]	AAA_lid_RFC1	e7k6vAB1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
AA [auth IC]	AAA_lid_RFC1	e7k6vIC1	A: alpha arrays	X: HTH	H: HTH	T: Three-helical HTH	F: AAA_lid_RFC1	ECOD (v295)
A [auth AA]	RNA_pol_Rpb1_5	e7k6vAA01	A: alpha arrays	X: Histone-like	H: all-alpha NTP pyrophosphatases	T: Hypothetical protein AF_0060	F: RNA_pol_Rpb1_5	ECOD (v295)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	Capsid protein VP1	-	-	virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR029053	Viral coat protein subunit	Homologous Superfamily
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR004005	Calicivirus coat protein	Domain
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR013643	Calicivirus coat protein C-terminal	Domain
A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], A [auth AA], AA [auth IC], B [auth AB], BA [auth JA], C [auth AC], CA [auth JB], D [auth BA], DA [auth JC], E [auth BB], EA [auth KA], F [auth BC], FA [auth KB], G [auth CA], GA [auth KC], H [auth CB], HA [auth LA], I [auth CC], IA [auth LB], J [auth DA], JA [auth LC], K [auth DB], KA [auth MA], L [auth DC], LA [auth MB], M [auth EA], MA [auth MC], N [auth EB], NA, O [auth EC], OA [auth NB], P [auth FA], PA [auth NC], Q [auth FB], QA [auth OA], R [auth FC], RA [auth OB], S [auth GA], SA [auth OC], T [auth GB], U [auth GC], V [auth HA], W [auth HB], X [auth HC], Y [auth IA], Z [auth IB]	IPR033703	Picornavirus/Calicivirus coat protein	Domain