Annotations: 7JZV

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D [auth O]	SCOP2B Superfamily	Core histone-like	8039341	3001387	SCOP2B (2022-06-29)
J [auth o]	SCOP2B Superfamily	Core histone-like	8039341	3001387	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	RING/U-box like	8037158	3000160	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	UBC-like	8033550	3000570	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	RING/U-box like	8004136	3000160	SCOP2B (2022-06-29)
E [auth P]	SCOP2B Superfamily	Core histone-like	8070531	3001387	SCOP2B (2022-06-29)
K [auth p]	SCOP2B Superfamily	Core histone-like	8070531	3001387	SCOP2B (2022-06-29)
F [auth Q]	SCOP2B Superfamily	Core histone-like	8070545	3001387	SCOP2B (2022-06-29)
L [auth q]	SCOP2B Superfamily	Core histone-like	8070545	3001387	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth N]	Histone_1	e7jzvN1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone_1	ECOD (1.6)
I [auth n]	Histone_1	e7jzvn1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone_1	ECOD (1.6)
D [auth O]	Histone	e7jzvO1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone	ECOD (1.6)
J [auth o]	Histone	e7jzvo1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone	ECOD (1.6)
A	UQ_con	e7jzvA2	A: a+b two layers	X: UBC-like	H: UBC-like (From Topology)	T: UBC-like	F: UQ_con	ECOD (1.6)
A	zf-C3HC4_4	e7jzvA1	A: few secondary structure elements	X: RING/U-box-like	H: RING/U-box-like	T: RING/U-box	F: zf-C3HC4_4	ECOD (1.6)
B	zf-RING_6	e7jzvB1	A: few secondary structure elements	X: RING/U-box-like	H: RING/U-box-like	T: RING/U-box	F: zf-RING_6	ECOD (1.6)
E [auth P]	Histone	e7jzvP1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone	ECOD (1.6)
K [auth p]	Histone	e7jzvp1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone	ECOD (1.6)
F [auth Q]	Histone_1	e7jzvQ1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone_1	ECOD (1.6)
L [auth q]	Histone_1	e7jzvq1	A: alpha arrays	X: Histone-like	H: Histone-related	T: Histone	F: Histone_1	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth N], I [auth n]	PF16211	C-terminus of histone H2A (Histone_H2A_C)	C-terminus of histone H2A	-	Family
C [auth N], I [auth n]	PF00125	Core histone H2A/H2B/H3/H4 (Histone)	Core histone H2A/H2B/H3/H4	-	Domain
D [auth O], J [auth o]	PF00125	Core histone H2A/H2B/H3/H4 (Histone)	Core histone H2A/H2B/H3/H4	-	Domain
A	PF00097	Zinc finger, C3HC4 type (RING finger) (zf-C3HC4)	Zinc finger, C3HC4 type (RING finger)	The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid [1]. Many protein ...	The C3HC4 type zinc-finger (RING finger) is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C where X is any amino acid [1]. Many proteins containing a RING finger play a key role in the ubiquitination pathway [2].	Domain
A	PF00179	Ubiquitin-conjugating enzyme (UQ_con)	Ubiquitin-conjugating enzyme	Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cystein ...	Proteins destined for proteasome-mediated degradation may be ubiquitinated. Ubiquitination follows conjugation of ubiquitin to a conserved cysteine residue of UBC homologues. TSG101 is one of several UBC homologues that lacks this active site cysteine [4, 5].	Domain
B	PF14835	zf-RING of BARD1-type protein (zf-RING_6)	zf-RING of BARD1-type protein	The RING domain of the breast and ovarian cancer tumour-suppressor BRCA1 interacts with multiple cognate proteins, including the RING protein BARD1. Proper function of the BRCA1 RING domain is critical, as evidenced by the many cancer-predisposing mu ...	The RING domain of the breast and ovarian cancer tumour-suppressor BRCA1 interacts with multiple cognate proteins, including the RING protein BARD1. Proper function of the BRCA1 RING domain is critical, as evidenced by the many cancer-predisposing mutations found within this domain. A dimer is formed between the RING domains of BRCA1 and BARD1. The BRCA1-BARD1 structure provides a model for its ubiquitin ligase activity, illustrates how the BRCA1 RING domain can be involved in associations with multiple protein partners and provides a framework for understanding cancer-causing mutations at the molecular level [1]. The corresponding BRCA1-RING domain is on family zf-C3HC4_2, Pfam:PF13923.	Domain
E [auth P], K [auth p]	PF00125	Core histone H2A/H2B/H3/H4 (Histone)	Core histone H2A/H2B/H3/H4	-	Domain
F [auth Q], L [auth q]	PF15511	Centromere kinetochore component CENP-T histone fold (CENP-T_C)	Centromere kinetochore component CENP-T histone fold	CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ...	CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly associate with CENP-A, but with histone H3 in the centromere region. CENP-T and -W form a hetero-tetramer with CENP-S and -X and bind to a ~100 bp region of nucleosome-free DNA forming a nucleosome-like structure. The DNA-CENP-T-W-S-X complex is likely to be associated with histone H3-containing nucleosomes rather than with CENP-nucleosomes. This domain is the C-terminal histone fold domain of CENP-T, which associates with chromatin [2-3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth N], I [auth n]	Histone H2A type 2-A	DNA binding binding organic cyclic compound binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity structural molecule activity structural constituent of chromatin	-	protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome chromatin chromosome cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle non-membrane-bounded organelle extracellular exosome membrane-bounded organelle extracellular vesicle protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome chromatin chromosome cellular anatomical entity intracellular organelle organelle intracellular non-membrane-bounded organelle non-membrane-bounded organelle extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle nucleus intracellular membrane-bounded organelle
D [auth O], J [auth o]	Histone H2B type 1-K	DNA binding binding organic cyclic compound binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity structural molecule activity structural constituent of chromatin	biological process involved in interspecies interaction between organisms innate immune response in mucosa response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus biological process involved in interspecies interaction between organisms innate immune response in mucosa response to stimulus immune response response to other organism defense response defense response to symbiont response to external stimulus response to biotic stimulus immune system process defense response to other organism response to stress innate immune response response to external biotic stimulus mucosal immune response organ or tissue specific immune response humoral immune response antimicrobial humoral response antimicrobial humoral immune response mediated by antimicrobial peptide cellular process disruption of cell in another organism disruption of anatomical structure in another organism killing of cells of another organism cell killing defense response to Gram-negative bacterium defense response to bacterium response to bacterium antibacterial humoral response defense response to Gram-positive bacterium	intracellular anatomical structure cytoplasm cellular anatomical entity cytosol protein-containing complex protein-DNA complex nucleosome chromatin chromosome intracellular organelle organelle intracellular non-membrane-bounded organelle non-membrane-bounded organelle extracellular region intracellular anatomical structure cytoplasm cellular anatomical entity cytosol protein-containing complex protein-DNA complex nucleosome chromatin chromosome intracellular organelle organelle intracellular non-membrane-bounded organelle non-membrane-bounded organelle extracellular region extracellular space membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
A	BRCA1,Ubiquitin-conjugating enzyme E2 D3	DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding organic cyclic compound binding nucleic acid binding transcription regulatory region nucleic acid binding ubiquitin protein ligase binding protein binding ubiquitin-like protein ligase binding enzyme binding identical protein binding DNA binding sequence-specific DNA binding sequence-specific double-stranded DNA binding transcription cis-regulatory region binding binding double-stranded DNA binding organic cyclic compound binding nucleic acid binding transcription regulatory region nucleic acid binding ubiquitin protein ligase binding protein binding ubiquitin-like protein ligase binding enzyme binding identical protein binding p53 binding cytoskeletal protein binding tubulin binding transcription coactivator activity transcription regulator activity transcription coregulator activity protein-macromolecule adaptor activity molecular adaptor activity RNA polymerase binding DNA-binding transcription factor activity DNA-binding transcription activator activity RNA binding damaged DNA binding aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity catalytic activity ubiquitin-protein transferase activity cation binding transition metal ion binding zinc ion binding ion binding metal ion binding small molecule binding ubiquitin conjugating enzyme activity ubiquitin-like protein conjugating enzyme activity ubiquitin-like protein ligase activity ubiquitin protein ligase activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of cellular process cellular biosynthetic process negative regulation of biological process negative regulation of gene expression via chromosomal CpG island methylation negative regulation of cellular metabolic process protein-DNA complex organization cellular component organization organic substance metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of cellular process cellular biosynthetic process negative regulation of biological process negative regulation of gene expression via chromosomal CpG island methylation negative regulation of cellular metabolic process protein-DNA complex organization cellular component organization organic substance metabolic process chromatin organization organic substance biosynthetic process negative regulation of cellular process chromatin remodeling cellular component organization or biogenesis negative regulation of macromolecule metabolic process regulation of biosynthetic process regulation of biological process protein-containing complex organization epigenetic regulation of gene expression cellular metabolic process negative regulation of metabolic process biological regulation regulation of cellular metabolic process regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process negative regulation of cellular biosynthetic process regulation of cellular biosynthetic process regulation of gene expression negative regulation of gene expression biosynthetic process negative regulation of biosynthetic process negative regulation of macromolecule biosynthetic process negative regulation of gene expression, epigenetic regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process regulation of metabolic process positive regulation of biological process positive regulation of cellular metabolic process positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of biosynthetic process positive regulation of macromolecule metabolic process positive regulation of cellular process positive regulation of gene expression positive regulation of cellular biosynthetic process cell cycle chromosome segregation cell cycle process localization extrinsic apoptotic signaling pathway via death domain receptors signaling negative regulation of signaling regulation of signal transduction regulation of programmed cell death extrinsic apoptotic signaling pathway negative regulation of cell communication cell communication negative regulation of extrinsic apoptotic signaling pathway negative regulation of apoptotic signaling pathway signal transduction regulation of signaling cell surface receptor signaling pathway negative regulation of response to stimulus negative regulation of programmed cell death regulation of apoptotic process negative regulation of extrinsic apoptotic signaling pathway via death domain receptors cell death negative regulation of signal transduction regulation of extrinsic apoptotic signaling pathway apoptotic signaling pathway negative regulation of apoptotic process regulation of response to stimulus regulation of extrinsic apoptotic signaling pathway via death domain receptors regulation of cell communication apoptotic process programmed cell death regulation of apoptotic signaling pathway negative regulation of cell cycle regulation of cell cycle organonitrogen compound metabolic process protein autoubiquitination primary metabolic process protein ubiquitination macromolecule modification protein metabolic process post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal response to ionizing radiation cellular response to ionizing radiation response to radiation response to abiotic stimulus cellular response to radiation cellular response to abiotic stimulus cellular response to environmental stimulus regulation of growth regulation of cellular component organization growth negative regulation of cell growth regulation of cell growth cell growth negative regulation of growth nucleobase-containing compound metabolic process organic cyclic compound metabolic process homologous recombination DNA recombination DNA metabolic process nucleic acid metabolic process regulation of cytoskeleton organization negative regulation of centriole replication non-membrane-bounded organelle assembly microtubule cytoskeleton organization negative regulation of organelle assembly cellular component biogenesis centrosome duplication negative regulation of centrosome cycle cellular component assembly centrosome cycle negative regulation of centrosome duplication regulation of centriole replication centriole replication centriole assembly microtubule organizing center organization organelle assembly negative regulation of cellular component organization regulation of cell cycle process negative regulation of cytoskeleton organization regulation of centrosome cycle regulation of microtubule-based process negative regulation of cell cycle process regulation of cellular component biogenesis regulation of organelle organization organelle organization negative regulation of organelle organization regulation of centrosome duplication regulation of organelle assembly microtubule-based process cytoskeleton organization regulation of cellular response to stress regulation of primary metabolic process positive regulation of response to stimulus positive regulation of DNA repair regulation of response to stress regulation of nucleobase-containing compound metabolic process DNA repair positive regulation of nucleobase-containing compound metabolic process regulation of DNA repair positive regulation of DNA metabolic process regulation of DNA metabolic process DNA damage checkpoint signaling regulation of cell cycle phase transition cell cycle phase transition intracellular signal transduction regulation of cell cycle checkpoint regulation of intracellular signal transduction negative regulation of cell cycle phase transition DNA integrity checkpoint signaling cell cycle checkpoint signaling signal transduction in response to DNA damage regulation of DNA damage checkpoint protein K6-linked ubiquitination protein polyubiquitination reactive oxygen species metabolic process negative regulation of reactive oxygen species metabolic process regulation of reactive oxygen species metabolic process response to organic substance intracellular receptor signaling pathway response to lipid intracellular estrogen receptor signaling pathway hormone-mediated signaling pathway negative regulation of intracellular steroid hormone receptor signaling pathway cellular response to endogenous stimulus response to hormone response to steroid hormone regulation of intracellular steroid hormone receptor signaling pathway regulation of intracellular estrogen receptor signaling pathway cellular response to organic substance cellular response to steroid hormone stimulus response to organic cyclic compound negative regulation of intracellular estrogen receptor signaling pathway cellular response to hormone stimulus response to endogenous stimulus cellular response to organic cyclic compound cellular response to chemical stimulus steroid hormone mediated signaling pathway response to chemical cellular response to lipid nuclear receptor signaling pathway intracellular steroid hormone receptor signaling pathway G2/M transition of mitotic cell cycle mitotic cell cycle negative regulation of mitotic cell cycle mitotic G2/M transition checkpoint regulation of mitotic cell cycle cell cycle G2/M phase transition negative regulation of mitotic cell cycle phase transition regulation of G2/M transition of mitotic cell cycle regulation of cell cycle G2/M phase transition regulation of mitotic cell cycle phase transition mitotic cell cycle checkpoint signaling mitotic cell cycle process negative regulation of cell cycle G2/M phase transition negative regulation of G2/M transition of mitotic cell cycle mitotic cell cycle phase transition DNA-templated transcription regulation of RNA metabolic process transcription by RNA polymerase II regulation of transcription by RNA polymerase II positive regulation of transcription by RNA polymerase II positive regulation of RNA metabolic process organic cyclic compound biosynthetic process regulation of DNA-templated transcription positive regulation of DNA-templated transcription RNA metabolic process RNA biosynthetic process nucleic acid biosynthetic process regulation of RNA biosynthetic process nucleobase-containing compound biosynthetic process positive regulation of RNA biosynthetic process random inactivation of X chromosome heterochromatin formation sex-chromosome dosage compensation dosage compensation by inactivation of X chromosome negative regulation of RNA biosynthetic process negative regulation of nucleobase-containing compound metabolic process negative regulation of DNA-templated transcription negative regulation of RNA metabolic process multicellular organismal process regulation of cytokine production cytokine production regulation of multicellular organismal process regulation of vascular endothelial growth factor production vascular endothelial growth factor production positive regulation of multicellular organismal process positive regulation of vascular endothelial growth factor production positive regulation of cytokine production postreplication repair response to cytokine cellular response to tumor necrosis factor cellular response to cytokine stimulus response to tumor necrosis factor DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity DNA replication DNA strand resection involved in replication fork processing replication fork processing developmental process multicellular organism development embryo development ending in birth or egg hatching chordate embryonic development anatomical structure development embryo development intrinsic apoptotic signaling pathway in response to DNA damage intrinsic apoptotic signaling pathway fatty acid metabolic process monocarboxylic acid biosynthetic process small molecule biosynthetic process oxoacid metabolic process carboxylic acid metabolic process lipid biosynthetic process organic acid biosynthetic process organic acid metabolic process fatty acid biosynthetic process carboxylic acid biosynthetic process cellular lipid metabolic process small molecule metabolic process monocarboxylic acid metabolic process lipid metabolic process mitotic G2 DNA damage checkpoint signaling mitotic DNA integrity checkpoint signaling mitotic DNA damage checkpoint signaling double-strand break repair recombinational repair double-strand break repair via homologous recombination regulation of developmental process angiogenesis regulation of vasculature development positive regulation of developmental process tube morphogenesis regulation of anatomical structure morphogenesis blood vessel development system development regulation of multicellular organismal development blood vessel morphogenesis tube development positive regulation of angiogenesis vasculature development circulatory system development anatomical structure morphogenesis positive regulation of vasculature development regulation of angiogenesis anatomical structure formation involved in morphogenesis cellular response to nitrogen compound response to alcohol response to organonitrogen compound response to oxygen-containing compound response to nitrogen compound cellular response to oxygen-containing compound cellular response to alcohol cellular response to organonitrogen compound response to indole-3-methanol cellular response to indole-3-methanol negative regulation of small molecule metabolic process regulation of lipid metabolic process negative regulation of lipid biosynthetic process cellular ketone metabolic process regulation of small molecule metabolic process regulation of cellular ketone metabolic process regulation of fatty acid metabolic process regulation of fatty acid biosynthetic process negative regulation of lipid metabolic process negative regulation of fatty acid biosynthetic process negative regulation of fatty acid metabolic process regulation of lipid biosynthetic process cell surface receptor protein serine/threonine kinase signaling pathway cellular response to growth factor stimulus regulation of transmembrane receptor protein serine/threonine kinase signaling pathway negative regulation of cellular response to growth factor stimulus negative regulation of BMP signaling pathway BMP signaling pathway enzyme-linked receptor protein signaling pathway cellular response to BMP stimulus regulation of BMP signaling pathway regulation of cellular response to growth factor stimulus response to BMP transforming growth factor beta receptor superfamily signaling pathway response to growth factor negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway organonitrogen compound catabolic process catabolic process proteolysis involved in protein catabolic process proteasomal protein catabolic process protein catabolic process proteasome-mediated ubiquitin-dependent protein catabolic process macromolecule catabolic process modification-dependent macromolecule catabolic process modification-dependent protein catabolic process proteolysis ubiquitin-dependent protein catabolic process organic substance catabolic process protein localization regulation of localization establishment of protein localization cellular localization regulation of protein localization protein targeting regulation of protein targeting to mitochondrion positive regulation of establishment of protein localization cellular macromolecule localization positive regulation of protein targeting to mitochondrion regulation of establishment of protein localization establishment of localization regulation of establishment of protein localization to mitochondrion establishment of protein localization to organelle regulation of protein targeting regulation of cellular localization macromolecule localization protein localization to organelle protein localization to mitochondrion positive regulation of protein localization protein targeting to mitochondrion establishment of protein localization to mitochondrion positive regulation of establishment of protein localization to mitochondrion protein K11-linked ubiquitination protein K48-linked ubiquitination negative regulation of transcription by RNA polymerase II protein monoubiquitination	membrane-bounded organelle intracellular organelle protein-containing complex intracellular anatomical structure BRCA1-C complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity catalytic complex DNA repair complex XY body sex chromosome membrane-bounded organelle intracellular organelle protein-containing complex intracellular anatomical structure BRCA1-C complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity catalytic complex DNA repair complex XY body sex chromosome intracellular non-membrane-bounded organelle chromosome non-membrane-bounded organelle cytoplasm male germ cell nucleus germ cell nucleus ubiquitin ligase complex transferase complex intracellular protein-containing complex nuclear ubiquitin ligase complex BRCA1-BARD1 complex cell periphery plasma membrane membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen BRCA1-A complex BRCA1-B complex condensed nuclear chromosome nuclear chromosome lateral element synaptonemal structure synaptonemal complex condensed chromosome gamma-tubulin ring complex gamma-tubulin complex microtubule organizing center cytoskeleton microtubule cytoskeleton ribonucleoprotein complex nuclear body extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cytosol endosome membrane endosome intracellular vesicle endomembrane system cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane cytoplasmic vesicle organelle membrane
B	BRCA1-associated RING domain protein 1	protein heterodimerization activity protein binding binding protein dimerization activity RNA binding organic cyclic compound binding nucleic acid binding kinase binding enzyme binding identical protein binding protein homodimerization activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein protein heterodimerization activity protein binding binding protein dimerization activity RNA binding organic cyclic compound binding nucleic acid binding kinase binding enzyme binding identical protein binding protein homodimerization activity aminoacyltransferase activity ubiquitin-like protein transferase activity catalytic activity, acting on a protein acyltransferase activity transferase activity catalytic activity ubiquitin-protein transferase activity cation binding ion binding metal ion binding small molecule binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of biological process regulation of cellular process phosphorylation cellular metabolic process biological regulation regulation of cellular metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process regulation of biological process regulation of cellular process phosphorylation cellular metabolic process biological regulation regulation of cellular metabolic process regulation of phosphate metabolic process phosphate-containing compound metabolic process regulation of phosphorylation regulation of phosphorus metabolic process metabolic process phosphorus metabolic process regulation of metabolic process protein localization negative regulation of protein transport regulation of localization establishment of protein localization negative regulation of nucleocytoplasmic transport nitrogen compound transport nucleocytoplasmic transport nuclear transport negative regulation of biological process negative regulation of intracellular protein transport negative regulation of transport localization establishment of localization in cell cellular macromolecule localization nuclear export regulation of protein export from nucleus regulation of intracellular transport organic substance transport negative regulation of establishment of protein localization intracellular transport regulation of nucleocytoplasmic transport protein localization to nucleus protein export from nucleus establishment of localization maintenance of location regulation of intracellular protein transport intracellular protein transport maintenance of protein location cellular localization regulation of protein localization transport maintenance of location in cell maintenance of protein location in cell negative regulation of cellular process negative regulation of protein export from nucleus negative regulation of protein localization negative regulation of intracellular transport regulation of transport regulation of establishment of protein localization maintenance of protein location in nucleus regulation of protein transport protein transport regulation of cellular localization macromolecule localization protein localization to organelle maintenance of protein localization in organelle negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death negative regulation of cell cycle cell cycle regulation of cell cycle positive regulation of programmed cell death positive regulation of biological process positive regulation of apoptotic process positive regulation of cellular process response to ionizing radiation cellular response to ionizing radiation response to radiation response to abiotic stimulus cellular response to radiation cellular response to abiotic stimulus cellular response to environmental stimulus catabolic process positive regulation of protein metabolic process macromolecule catabolic process regulation of primary metabolic process positive regulation of metabolic process organic substance metabolic process positive regulation of macromolecule metabolic process protein metabolic process organonitrogen compound catabolic process organonitrogen compound metabolic process regulation of protein metabolic process primary metabolic process regulation of macromolecule metabolic process protein catabolic process regulation of catabolic process positive regulation of protein catabolic process positive regulation of catabolic process macromolecule metabolic process organic substance catabolic process regulation of protein catabolic process nucleobase-containing compound metabolic process organic cyclic compound metabolic process homologous recombination DNA recombination DNA metabolic process nucleic acid metabolic process protein ubiquitination macromolecule modification post-translational protein modification protein modification process protein modification by small protein conjugation protein modification by small protein conjugation or removal DNA damage checkpoint signaling regulation of cell cycle phase transition signaling regulation of cellular response to stress cell cycle phase transition regulation of signal transduction intracellular signal transduction cell communication regulation of cell cycle checkpoint regulation of intracellular signal transduction regulation of response to stress negative regulation of cell cycle phase transition signal transduction cell cycle process regulation of signaling regulation of cell cycle process DNA integrity checkpoint signaling negative regulation of cell cycle process cell cycle checkpoint signaling regulation of response to stimulus signal transduction in response to DNA damage regulation of cell communication regulation of DNA damage checkpoint protein K6-linked ubiquitination protein polyubiquitination DNA-templated DNA replication DNA-templated DNA replication maintenance of fidelity DNA replication DNA strand resection involved in replication fork processing replication fork processing DNA repair negative regulation of mRNA 3'-end processing cellular biosynthetic process RNA metabolic process mRNA processing negative regulation of mRNA metabolic process regulation of RNA metabolic process organic substance biosynthetic process negative regulation of nucleobase-containing compound metabolic process RNA 3'-end processing regulation of nucleobase-containing compound metabolic process RNA processing negative regulation of mRNA processing negative regulation of macromolecule metabolic process regulation of mRNA processing negative regulation of metabolic process mRNA 3'-end processing regulation of mRNA 3'-end processing gene expression mRNA metabolic process macromolecule biosynthetic process biosynthetic process nucleic acid catabolic process regulation of mRNA metabolic process negative regulation of RNA metabolic process multicellular organismal process multicellular organismal-level homeostasis homeostatic process anatomical structure homeostasis tissue homeostasis G2/M transition of mitotic cell cycle mitotic cell cycle negative regulation of mitotic cell cycle mitotic G2/M transition checkpoint regulation of mitotic cell cycle cell cycle G2/M phase transition negative regulation of mitotic cell cycle phase transition regulation of G2/M transition of mitotic cell cycle regulation of cell cycle G2/M phase transition regulation of mitotic cell cycle phase transition mitotic cell cycle checkpoint signaling mitotic cell cycle process negative regulation of cell cycle G2/M phase transition negative regulation of G2/M transition of mitotic cell cycle mitotic cell cycle phase transition regulation of DNA repair regulation of DNA metabolic process	membrane-bounded organelle intracellular organelle protein-containing complex intracellular anatomical structure BRCA1-C complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity ubiquitin ligase complex catalytic complex transferase complex nuclear ubiquitin ligase complex membrane-bounded organelle intracellular organelle protein-containing complex intracellular anatomical structure BRCA1-C complex organelle nucleus nuclear protein-containing complex intracellular membrane-bounded organelle cellular anatomical entity ubiquitin ligase complex catalytic complex transferase complex nuclear ubiquitin ligase complex intracellular protein-containing complex BRCA1-BARD1 complex membrane-enclosed lumen intracellular organelle lumen nuclear speck nuclear body nucleoplasm organelle lumen nuclear lumen cytoplasm BRCA1-A complex BRCA1-B complex intracellular non-membrane-bounded organelle cytoplasmic ribonucleoprotein granule supramolecular complex non-membrane-bounded organelle ribonucleoprotein granule
E [auth P], K [auth p]	Histone H3.2	DNA binding binding organic cyclic compound binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity structural molecule activity structural constituent of chromatin	protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization	extracellular region cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome extracellular region cellular anatomical entity extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle protein-containing complex intracellular anatomical structure protein-DNA complex nucleosome chromatin chromosome intracellular organelle intracellular non-membrane-bounded organelle non-membrane-bounded organelle nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
F [auth Q], L [auth q]	Histone H4	DNA binding binding organic cyclic compound binding nucleic acid binding protein heterodimerization activity protein binding protein dimerization activity RNA binding structural molecule activity structural constituent of chromatin	protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization organelle organization protein-containing complex organization protein-DNA complex assembly protein-DNA complex organization cellular component organization cellular component biogenesis cellular component assembly chromatin organization protein-containing complex assembly chromatin remodeling cellular process cellular component organization or biogenesis nucleosome assembly nucleosome organization organelle organization telomere organization chromosome organization protein localization protein localization to chromatin cellular localization protein localization to chromosome, centromeric region localization protein localization to chromosome protein localization to organelle cellular macromolecule localization macromolecule localization protein localization to CENP-A containing chromatin multicellular organismal process regulation of cellular process cellular developmental process regulation of developmental process regulation of megakaryocyte differentiation negative regulation of biological process megakaryocyte differentiation cell development regulation of cell differentiation regulation of cell development multicellular organism development negative regulation of megakaryocyte differentiation cell differentiation anatomical structure development negative regulation of cellular process negative regulation of cell differentiation regulation of immune system process regulation of multicellular organismal process developmental process regulation of biological process regulation of multicellular organismal development hemopoiesis negative regulation of developmental process regulation of myeloid cell differentiation biological regulation negative regulation of myeloid cell differentiation myeloid cell differentiation immune system process regulation of hemopoiesis	membrane cellular anatomical entity extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle protein-containing complex intracellular anatomical structure CENP-A containing chromatin membrane cellular anatomical entity extracellular region extracellular exosome membrane-bounded organelle extracellular vesicle extracellular organelle organelle extracellular space vesicle extracellular membrane-bounded organelle protein-containing complex intracellular anatomical structure CENP-A containing chromatin protein-DNA complex nucleosome chromosome chromatin chromosomal region intracellular organelle chromosome, centromeric core domain CENP-A containing nucleosome intracellular non-membrane-bounded organelle chromosome, centromeric region non-membrane-bounded organelle chromosome, telomeric region nucleus membrane-enclosed lumen intracellular membrane-bounded organelle intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen
G [auth X]	Widom 601 153-bp	-	-	-
H [auth Y]	Widom 601 153-bp	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth N], I [auth n]	IPR009072	Histone-fold	Homologous Superfamily
C [auth N], I [auth n]	IPR007125	Histone H2A/H2B/H3	Domain
C [auth N], I [auth n]	IPR002119	Histone H2A	Family
C [auth N], I [auth n]	IPR032454	Histone H2A, C-terminal domain	Domain
C [auth N], I [auth n]	IPR032458	Histone H2A conserved site	Conserved Site
D [auth O], J [auth o]	IPR009072	Histone-fold	Homologous Superfamily
D [auth O], J [auth o]	IPR007125	Histone H2A/H2B/H3	Domain
D [auth O], J [auth o]	IPR000558	Histone H2B	Family
A	IPR031099	BRCA1-associated	Family
A	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
A	IPR025994	BRCA1, serine-rich domain	Domain
A	IPR001841	Zinc finger, RING-type	Domain
A	IPR011364	Breast cancer type 1 susceptibility protein (BRCA1)	Family
A	IPR001357	BRCT domain	Domain
A	IPR036420	BRCT domain superfamily	Homologous Superfamily
A	IPR018957	Zinc finger, C3HC4 RING-type	Domain
A	IPR017907	Zinc finger, RING-type, conserved site	Conserved Site
A	IPR016135	Ubiquitin-conjugating enzyme/RWD-like	Homologous Superfamily
A	IPR000608	Ubiquitin-conjugating enzyme E2	Domain
A	IPR023313	Ubiquitin-conjugating enzyme, active site	Active Site
B	IPR036770	Ankyrin repeat-containing domain superfamily	Homologous Superfamily
B	IPR039503	BARD1, Zinc finger, RING-type	Domain
B	IPR001357	BRCT domain	Domain
B	IPR036420	BRCT domain superfamily	Homologous Superfamily
B	IPR002110	Ankyrin repeat	Repeat
B	IPR017907	Zinc finger, RING-type, conserved site	Conserved Site
B	IPR013083	Zinc finger, RING/FYVE/PHD-type	Homologous Superfamily
B	IPR001841	Zinc finger, RING-type	Domain
E [auth P], K [auth p]	IPR009072	Histone-fold	Homologous Superfamily
E [auth P], K [auth p]	IPR007125	Histone H2A/H2B/H3	Domain
E [auth P], K [auth p]	IPR000164	Histone H3/CENP-A	Family
F [auth Q], L [auth q]	IPR009072	Histone-fold	Homologous Superfamily
F [auth Q], L [auth q]	IPR035425	CENP-T/Histone H4, histone fold	Domain
F [auth Q], L [auth q]	IPR001951	Histone H4	Family
F [auth Q], L [auth q]	IPR019809	Histone H4, conserved site	Conserved Site
F [auth Q], L [auth q]	IPR004823	TATA box binding protein associated factor (TAF), histone-like fold domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth N], I [auth n]	Pharos: Q6FI13	breast cancer idiopathic scoliosis primary hyperoxaluria type 1
D [auth O], J [auth o]	Pharos: O60814	breast carcinoma autism spectrum disorder endogenous depression Mammary Neoplasms, Human breast cancer
A	Pharos: P61077	prostate cancer ovarian cancer breast cancer breast-ovarian cancer, familial, susceptibility to, 1 hereditary breast ovarian cancer syndrome cancer carcinoma Mammary Neoplasms, Experimental adenoid cystic carcinoma mouth disease malignant pancreatic neoplasm salivary gland adenoid cystic carcinoma exocrine pancreatic carcinoma ovarian carcinoma lung cancer prostate cancer ovarian cancer breast cancer breast-ovarian cancer, familial, susceptibility to, 1 hereditary breast ovarian cancer syndrome cancer carcinoma Mammary Neoplasms, Experimental adenoid cystic carcinoma mouth disease malignant pancreatic neoplasm salivary gland adenoid cystic carcinoma exocrine pancreatic carcinoma ovarian carcinoma lung cancer breast carcinoma sarcomatoid carcinoma sporadic breast cancer colorectal cancer depressive disorder fallopian tube cancer Fanconi anemia ovarian neoplasm hereditary breast carcinoma pancreatic intraductal papillary-mucinous neoplasm benign neoplasm of pancreas Li-Fraumeni syndrome peripheral neuropathy Lynch syndrome malignant mesothelioma primitive neuroectodermal tumor schizophrenia undifferentiated carcinoma congenital anemia familial pancreatic carcinoma non-small cell lung carcinoma Fanconi anemia complementation group A glioblastoma pancreatic cancer, susceptibility to, 4 BAP1-related tumor predisposition syndrome pancreatic neoplasm breast adenocarcinoma lung adenocarcinoma peritoneal carcinoma malignant colon neoplasm prostate adenocarcinoma mammary neoplasms, animal serous adenocarcinoma medulloblastoma nasopharyngeal carcinoma familial prostate carcinoma osteosarcoma Fanconi anemia, complementation group S anemia hematopoietic and lymphoid system neoplasm pancreatic intraductal papillary-mucinous carcinoma benign neoplasm large cell medulloblastoma peripheral nervous system disease primary peritoneal carcinoma malignant ependymoma cholangiocarcinoma pancreatic intraductal papillary-mucinous neoplasm pituitary cancer rheumatoid arthritis astrocytic tumor autism spectrum disorder endogenous depression IgA glomerulonephritis malignant ependymoma non-small cell lung carcinoma pancreatic ductal adenocarcinoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia plasma cell myeloma attention deficit hyperactivity disorder, inattentive type Down syndrome esophageal adenocarcinoma juvenile dermatomyositis medulloblastoma oligodendroglioma pancreatic intraductal papillary-mucinous carcinoma Pick disease progressive supranuclear palsy atypical teratoid rhabdoid tumor Emery-Dreifuss muscular dystrophy glioblastoma large cell medulloblastoma myopathy ovarian cancer
B	Pharos: Q99728	neuroblastoma breast carcinoma hereditary breast carcinoma hereditary breast ovarian cancer syndrome ovarian cancer breast cancer malignant ependymoma Malignant neoplasm of breast adrenal cortex carcinoma oligodendroglioma atypical teratoid rhabdoid tumor ovarian carcinoma pancreatic ductal adenocarcinoma dermatomyositis pilocytic astrocytoma neuroblastoma breast carcinoma hereditary breast carcinoma hereditary breast ovarian cancer syndrome ovarian cancer breast cancer malignant ependymoma Malignant neoplasm of breast adrenal cortex carcinoma oligodendroglioma atypical teratoid rhabdoid tumor ovarian carcinoma pancreatic ductal adenocarcinoma dermatomyositis pilocytic astrocytoma uterine cancer large cell medulloblastoma malignant glioma medulloblastoma amyotrophic lateral sclerosis osteosarcoma breast adenocarcinoma ovarian clear cell adenocarcinoma cancer pancreatic intraductal papillary-mucinous carcinoma ductal breast carcinoma in situ primitive neuroectodermal tumor lung carcinoma malignant mesothelioma non-small cell lung carcinoma astrocytic tumor ovarian neoplasm cutaneous lupus erythematosus pancreatic intraductal papillary-mucinous neoplasm glioblastoma subependymal giant cell astrocytoma invasive ductal breast carcinoma
E [auth P], K [auth p]	Pharos: Q71DI3	idiopathic scoliosis
F [auth Q], L [auth q]	Pharos: P62805	lung carcinoma Malignant neoplasm of breast non-small cell lung carcinoma Pick disease squamous cell lung carcinoma acute myeloid leukemia atypical teratoid rhabdoid tumor breast carcinoma ductal breast carcinoma in situ exocrine pancreatic carcinoma hepatocellular carcinoma lung adenocarcinoma malignant colon neoplasm malignant pancreatic neoplasm osteoarthritis lung carcinoma Malignant neoplasm of breast non-small cell lung carcinoma Pick disease squamous cell lung carcinoma acute myeloid leukemia atypical teratoid rhabdoid tumor breast carcinoma ductal breast carcinoma in situ exocrine pancreatic carcinoma hepatocellular carcinoma lung adenocarcinoma malignant colon neoplasm malignant pancreatic neoplasm osteoarthritis pilocytic astrocytoma ulcerative colitis allergic rhinitis autism spectrum disorder cystic fibrosis endogenous depression glioblastoma hypertensive disorder lung cancer malignant mesothelioma multiple sclerosis osteosarcoma psoriasis astrocytic tumor breast cancer diabetes mellitus endometriosis gout invasive ductal breast carcinoma