7E8T

Monomer of Ypt32-TRAPPII

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth L]SCOP2B SuperfamilyRas-like P-loop GTPases8056347 3002022 SCOP2B (2022-06-29)
J [auth D]SCOP2B SuperfamilySNARE-like8090321 3001113 SCOP2B (2022-06-29)
K [auth F]SCOP2B SuperfamilyLigand-binding domain in the NO signalling and Golgi transport8065542 3001668 SCOP2B (2022-06-29)
L [auth C]SCOP2B SuperfamilyLigand-binding domain in the NO signalling and Golgi transport8065542 3001668 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth L]PF00071e7e8tL1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: PF00071ECOD (1.6)
D [auth K]F_UNCLASSIFIEDe7e8tK1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: F_UNCLASSIFIEDECOD (1.6)
D [auth K]PF12735e7e8tK2 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: PF12735ECOD (1.6)
E [auth B]PF04051e7e8tB1 A: a+b complex topologyX: H-NOX domain (From Topology)H: H-NOX domain (From Topology)T: H-NOX domainF: PF04051ECOD (1.6)
G [auth E]PF04099e7e8tE1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04099ECOD (1.6)
HPF04628e7e8tH1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04628ECOD (1.6)
I [auth A]PF04628e7e8tA1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04628ECOD (1.6)
J [auth D]PF04099e7e8tD1 A: a+b three layersX: Profilin-likeH: profilin-like (From Topology)T: profilin-likeF: PF04099ECOD (1.6)
K [auth F]PF04051e7e8tF1 A: a+b complex topologyX: H-NOX domain (From Topology)H: H-NOX domain (From Topology)T: H-NOX domainF: PF04051ECOD (1.6)
L [auth C]PF04051e7e8tC1 A: a+b complex topologyX: H-NOX domain (From Topology)H: H-NOX domain (From Topology)T: H-NOX domainF: PF04051ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth L]PF00071Ras family (Ras)Ras familyIncludes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motil ...Includes sub-families Ras, Rab, Rac, Ral, Ran, Rap Ypt1 and more. Shares P-loop motif with GTP_EFTU, arf and myosin_head. See Pfam:PF00009 Pfam:PF00025, Pfam:PF00063. As regards Rab GTPases, these are important regulators of vesicle formation, motility and fusion. They share a fold in common with all Ras GTPases: this is a six-stranded beta-sheet surrounded by five alpha-helices [1].
Domain
B [auth I]PF12584Trafficking protein particle complex subunit 10, TRAPPC10 (TRAPPC10)Trafficking protein particle complex subunit 10, TRAPPC10- Family
C [auth J]PF08626Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit (TRAPPC9-Trs120)Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit- Family
D [auth K]PF12735TRAPP trafficking subunit Trs65 (Trs65)TRAPP trafficking subunit Trs65- Family
E [auth B]PF04051Transport protein particle (TRAPP) component (TRAPP)Transport protein particle (TRAPP) component- Family
F [auth G]PF04051Transport protein particle (TRAPP) component (TRAPP)Transport protein particle (TRAPP) component- Family
G [auth E]PF04099Sybindin-like family (Sybindin)Sybindin-like family- Family
PF04628Sedlin, N-terminal conserved region (Sedlin_N)Sedlin, N-terminal conserved region- Family
I [auth A]PF04628Sedlin, N-terminal conserved region (Sedlin_N)Sedlin, N-terminal conserved region- Family
J [auth D]PF04099Sybindin-like family (Sybindin)Sybindin-like family- Family
K [auth F],
L [auth C]		PF04051Transport protein particle (TRAPP) component (TRAPP)Transport protein particle (TRAPP) component- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth L]GTP-binding protein YPT32/YPT11
B [auth I]Trafficking protein particle complex II-specific subunit 130-
C [auth J]Trafficking protein particle complex II-specific subunit 120-
D [auth K]Trafficking protein particle complex II-specific subunit 65-
E [auth B]Trafficking protein particle complex subunit 33-
F [auth G]Trafficking protein particle complex subunit 31-
G [auth E]Trafficking protein particle complex subunit 23-
Trafficking protein particle complex subunit 20-
I [auth A]TRAPP-associated protein TCA17-
J [auth D]Trafficking protein particle complex subunit BET5-
K [auth F],
L [auth C]		Trafficking protein particle complex subunit BET3-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth L]IPR001806Small GTPaseFamily
A [auth L]IPR005225Small GTP-binding protein domainDomain
A [auth L]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
B [auth I]IPR022233TRAPP II complex TRAPPC10, C-terminalDomain
B [auth I]IPR045126Trafficking protein particle complex subunit TRAPPC10/Trs130Family
C [auth J]IPR013935TRAPP II complex, Trs120Family
D [auth K]IPR024662Trafficking protein particle complex II-specific subunit 65Family
E [auth B]IPR024096NO signalling/Golgi transport ligand-binding domain superfamilyHomologous Superfamily
E [auth B]IPR007194Transport protein particle (TRAPP) componentFamily
E [auth B]IPR037992TRAPP complex, Trs33 subunitFamily
F [auth G]IPR024096NO signalling/Golgi transport ligand-binding domain superfamilyHomologous Superfamily
F [auth G]IPR016696TRAPP I complex, subunit 5Family
F [auth G]IPR007194Transport protein particle (TRAPP) componentFamily
G [auth E]IPR007233Trafficking protein particle complex subunitFamily
G [auth E]IPR011012Longin-like domain superfamilyHomologous Superfamily
IPR011012Longin-like domain superfamilyHomologous Superfamily
IPR006722Trafficking protein particle complex subunit 2Family
I [auth A]IPR011012Longin-like domain superfamilyHomologous Superfamily
I [auth A]IPR006722Trafficking protein particle complex subunit 2Family
J [auth D]IPR007233Trafficking protein particle complex subunitFamily
J [auth D]IPR011012Longin-like domain superfamilyHomologous Superfamily
K [auth F],
L [auth C]		IPR024096NO signalling/Golgi transport ligand-binding domain superfamilyHomologous Superfamily
K [auth F],
L [auth C]		IPR007194Transport protein particle (TRAPP) componentFamily
K [auth F],
L [auth C]		IPR016721Bet3 familyFamily