7DVV | pdb_00007dvv

Heme sensor protein PefR from Streptococcus agalactiae bound to operator DNA (28-mer)

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPP-bindinge7dvvB1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PP-bindingECOD (v295.2)
APP-bindinge7dvvA1 A: alpha arraysX: putative RnfG subunit of electron transport complexH: putative RnfG subunit of electron transport complexT: Aspartate/ornithine carbamoyltransferaseF: PP-bindingECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (utative)
A1.10.10.10 Mainly Alpha Orthogonal Bundle Arc Repressor Mutant, subunit A Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domainCATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
D [auth M]DNA (28-MER)---
C [auth L]DNA (28-MER)---
A, B
HTH marR-type domain-containing protein -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR000835MarR-type HTH domainDomain
A, B
IPR023187Transcriptional regulator MarR-type, conserved siteConserved Site
A, B
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B
IPR039422Transcription regulators MarR/SlyA-likeFamily
A, B
IPR036390Winged helix DNA-binding domain superfamilyHomologous Superfamily