7CNU | pdb_00007cnu

Crystal structure of DLC2 in complex with BMF peptide

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
D [auth E]	Lant_dehydr_C	e7cnuE1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lant_dehydr_C	ECOD (v294.1)
B	Lant_dehydr_C	e7cnuB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: RIFT-related	T: FMN-binding split barrel 2	F: Lant_dehydr_C	ECOD (v294.1)
A	RNase_H	e7cnuA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: RNase_H	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, D [auth E]	PF01221	Dynein light chain type 1 (Dynein_light)	Dynein light chain type 1		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C	Bcl-2-modifying factor	-	regulation of biological process positive regulation of programmed cell death regulation of cellular process regulation of apoptotic process biological regulation positive regulation of biological process regulation of programmed cell death cell death positive regulation of apoptotic process cellular process apoptotic process programmed cell death positive regulation of cellular process anoikis regulation of biological process positive regulation of programmed cell death regulation of cellular process regulation of apoptotic process biological regulation positive regulation of biological process regulation of programmed cell death cell death positive regulation of apoptotic process cellular process apoptotic process programmed cell death positive regulation of cellular process anoikis cellular response to stimulus positive regulation of organelle organization regulation of cellular component organization positive regulation of cellular component organization response to stimulus signaling apoptotic mitochondrial changes regulation of release of cytochrome c from mitochondria cell communication cellular component organization positive regulation of release of cytochrome c from mitochondria cellular component organization or biogenesis signal transduction mitochondrion organization regulation of organelle organization apoptotic signaling pathway release of cytochrome c from mitochondria organelle organization regulation of mitochondrion organization negative regulation of catabolic process catabolic process negative regulation of metabolic process autophagy negative regulation of biological process regulation of catabolic process regulation of autophagy negative regulation of autophagy negative regulation of cellular process metabolic process process utilizing autophagic mechanism regulation of metabolic process protein-containing complex organization positive regulation of cellular component biogenesis regulation of cellular component biogenesis cellular component biogenesis positive regulation of protein-containing complex assembly regulation of protein-containing complex assembly cellular component assembly protein-containing complex assembly	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle mitochondrial membrane mitochondrion membrane organelle outer membrane intracellular membrane-bounded organelle intracellular organelle organelle envelope bounding membrane of organelle organelle cellular anatomical structure intracellular anatomical structure cytoplasm cytosol membrane-bounded organelle mitochondrial membrane mitochondrion membrane organelle outer membrane intracellular membrane-bounded organelle intracellular organelle organelle envelope bounding membrane of organelle organelle mitochondrial envelope mitochondrial outer membrane outer membrane organelle membrane cell periphery plasma membrane protein-containing complex cytoskeleton membraneless organelle intracellular membraneless organelle actin cytoskeleton myosin complex
A, B, D [auth E]	Dynein light chain 2, cytoplasmic	protein-containing complex binding binding scaffold protein binding protein binding dynein intermediate chain binding identical protein binding	microtubule-based process cellular process	membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection membrane intracellular organelle intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle centrosome microtubule organizing center membrane-bounded organelle cell projection cellular anatomical structure organelle cilium plasma membrane bounded cell projection membrane intracellular organelle intracellular anatomical structure cytoskeleton membraneless organelle intracellular membraneless organelle centrosome microtubule organizing center microtubule cytoskeleton cytoplasm cytosol postsynaptic density postsynapse neuron to neuron synapse postsynaptic specialization synapse cell junction asymmetric synapse ciliary tip cell periphery plasma membrane protein-containing complex cytoplasmic dynein complex catalytic complex dynein complex microtubule associated complex non-motile cilium 9+0 non-motile cilium glutamatergic synapse polymeric cytoskeletal fiber supramolecular fiber microtubule supramolecular polymer supramolecular complex actin cytoskeleton myosin complex myosin V complex unconventional myosin complex nucleus intracellular membrane-bounded organelle

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C	IPR028192	Bcl-2-modifying factor	Family
A, B, D [auth E]	IPR037177	Dynein light chain superfamily	Homologous Superfamily
A, B, D [auth E]	IPR001372	Dynein light chain, type 1/2	Family
A, B, D [auth E]	IPR019763	Dynein light chain, type 1/2, conserved site	Conserved Site

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C	Pharos: Q96LC9	B-cell chronic lymphocytic leukemia Liver Cirrhosis, Experimental atypical teratoid rhabdoid tumor Ewing sarcoma glioblastoma medulloblastoma endometrial carcinoma large cell medulloblastoma
A, B, D [auth E]	Pharos: Q96FJ2	adrenal cortex carcinoma malignant ependymoma tuberculosis atypical teratoid rhabdoid tumor osteosarcoma hepatocellular carcinoma pancreatic ductal adenocarcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.