7CFU | pdb_00007cfu

Crystal Structure of FMN-dependent Cysteine Decarboxylases SpaF

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
X	d7cfux_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
W	d7cfuw_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
V	d7cfuv_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
U	d7cfuu_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
T	d7cfut_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
S [auth R]	d7cfur_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
R [auth Q]	d7cfuq_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
Q [auth O]	d7cfuo_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
P [auth N]	d7cfun_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
O [auth M]	d7cfum_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
N [auth L]	d7cful_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
M [auth K]	d7cfuk_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
L [auth J]	d7cfuj_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
K [auth I]	d7cfui_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
J [auth G]	d7cfug_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
I [auth E]	d7cfue_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
H [auth D]	d7cfud_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
G [auth C]	d7cfuc_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
F [auth B]	d7cfub_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
E [auth A]	d7cfua_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
D [auth P]	d7cfup_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
C [auth H]	d7cfuh_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
B [auth S]	d7cfus_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)
A [auth F]	d7cfuf_	Alpha and beta proteins (a/b)	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	Homo-oligomeric flavin-containing Cys decarboxylases, HFCD	automated matches	automated matches	(Streptomyces sparsogenes DSM 40356 ) [TaxId: 1331668 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
X	PsbY	e7cfuX1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
W	PsbY	e7cfuW1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
V	PsbY	e7cfuV1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
U	PsbY	e7cfuU1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
T	PsbY	e7cfuT1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
S [auth R]	PsbY	e7cfuR1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
R [auth Q]	PsbY	e7cfuQ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
Q [auth O]	PsbY	e7cfuO1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
P [auth N]	PsbY	e7cfuN1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
O [auth M]	PsbY	e7cfuM1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
N [auth L]	PsbY	e7cfuL1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
M [auth K]	PsbY	e7cfuK1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
L [auth J]	PsbY	e7cfuJ1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
K [auth I]	PsbY	e7cfuI1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
J [auth G]	PsbY	e7cfuG1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
I [auth E]	PsbY	e7cfuE1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
H [auth D]	PsbY	e7cfuD1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
G [auth C]	PsbY	e7cfuC1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
F [auth B]	PsbY	e7cfuB1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
E [auth A]	PsbY	e7cfuA1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
D [auth P]	PsbY	e7cfuP1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
C [auth H]	PsbY	e7cfuH1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
B [auth S]	PsbY	e7cfuS1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: PsbY	ECOD (v294.1)
A [auth F]	Spuma_A9PTase	e7cfuF1	A: a/b three-layered sandwiches	X: CNF1/YfiH-like putative cysteine hydrolases	H: Bromodomain	T: Bromodomain	F: Spuma_A9PTase	ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth G], K [auth I], L [auth J], M [auth K], N [auth L], O [auth M], P [auth N], Q [auth O], R [auth Q], S [auth R], T, U, V, W, X	PF02441	Flavoprotein (Flavoprotein)	Flavoprotein	This domain is found in diverse flavoprotein enzymes, including covering the whole length of the sequence of epidermin biosynthesis protein from Staphylococcus epidermidis (EpiD, Swiss:P30197), which has been shown to bind FMN [1]. This enzyme cataly ...	This domain is found in diverse flavoprotein enzymes, including covering the whole length of the sequence of epidermin biosynthesis protein from Staphylococcus epidermidis (EpiD, Swiss:P30197), which has been shown to bind FMN [1]. This enzyme catalyses the removal of two reducing equivalents from the cysteine residue of the C-terminal meso-lanthionine of epidermin to form a --C==C-- double bond. This family also includes the B chain of dipicolinate synthase a small polar molecule that accumulates to high concentrations in bacterial endospores, and is thought to play a role in spore heat resistance, or the maintenance of heat resistance [2]. dipicolinate synthase catalyses the formation of dipicolinic acid from dihydroxydipicolinic acid. This family also includes phenyl-acrylic acid decarboxylase Swiss:P33751 (EC:4.1.1.-) [3].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth G], K [auth I], L [auth J], M [auth K], N [auth L], O [auth M], P [auth N], Q [auth O], R [auth Q], S [auth R], T, U, V, W, X	DNA/pantothenate metabolism flavoprotein	FMN binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding phosphopantothenoylcysteine decarboxylase activity carboxy-lyase activity lyase activity catalytic activity FMN binding binding nucleoside phosphate binding ion binding anion binding nucleotide binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding phosphopantothenoylcysteine decarboxylase activity carboxy-lyase activity lyase activity catalytic activity carbon-carbon lyase activity	nucleoside phosphate metabolic process coenzyme A biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process purine-containing compound metabolic process nucleobase-containing compound metabolic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process nucleoside phosphate biosynthetic process phosphate-containing compound metabolic process nucleoside phosphate metabolic process coenzyme A biosynthetic process primary metabolic process nucleobase-containing compound biosynthetic process purine-containing compound metabolic process nucleobase-containing compound metabolic process sulfur compound biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process nucleobase-containing small molecule metabolic process purine-containing compound biosynthetic process nucleoside phosphate biosynthetic process phosphate-containing compound metabolic process metabolic process cellular process small molecule metabolic process sulfur compound metabolic process phosphorus metabolic process coenzyme A metabolic process	protein-containing complex cellular anatomical structure intracellular anatomical structure catalytic complex cytoplasm phosphopantothenoylcysteine decarboxylase complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth G], K [auth I], L [auth J], M [auth K], N [auth L], O [auth M], P [auth N], Q [auth O], R [auth Q], S [auth R], T, U, V, W, X	IPR036551	Flavin prenyltransferase-like	Homologous Superfamily
A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], A [auth F], B [auth S], C [auth H], D [auth P], E [auth A], F [auth B], G [auth C], H [auth D], I [auth E], J [auth G], K [auth I], L [auth J], M [auth K], N [auth L], O [auth M], P [auth N], Q [auth O], R [auth Q], S [auth R], T, U, V, W, X	IPR003382	Flavoprotein	Domain