7C28 | pdb_00007c28

Unusual quaternary structure of a homodimeric synergistic toxin from mamba snake venom

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d7c28a_	Small proteins	Snake toxin-like	Snake toxin-like	automated matches	automated matches	Eastern Jameson's mamba (Dendroaspis jamesoni kaimosae ) [TaxId: 8619 ],	SCOPe (2.08)
B	d7c28b_	Small proteins	Snake toxin-like	Snake toxin-like	automated matches	automated matches	Eastern Jameson's mamba (Dendroaspis jamesoni kaimosae ) [TaxId: 8619 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A	SCOP2 Family	Snake venom toxins	8101486	4003278	SCOP2 (2022-06-29)
A	SCOP2 Superfamily	Snake toxin-like	8101487	3000545	SCOP2 (2022-06-29)
B	SCOP2B Superfamily	Snake toxin-like	8101487	3000545	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	Ldh_1_C	e7c28A1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)
B	Ldh_1_C	e7c28B1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: Ldh_1_C	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Synergistic-type venom protein S2C4	toxin activity	-	cellular anatomical structure extracellular region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR018354	Snake toxin, conserved site	Conserved Site
A, B	IPR045860	Snake toxin-like superfamily	Homologous Superfamily
A, B	IPR054131	Snake toxin cobra-type	Family
A, B	IPR003571	Snake three-finger toxin	Family

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.