Structure of ATSI with bovine trypsin
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| O [auth T] | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| M [auth Q] | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| K [auth N] | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| I [auth K] | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| G [auth H] | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| C [auth B] | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| A [auth U] | SCOP2B Superfamily | Trypsin-like serine proteases | 8037496 | 3000114 | SCOP2B (2022-06-29) |
| P [auth V] | SCOP2B Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2B (2022-06-29) |
| N [auth R] | SCOP2B Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2B (2022-06-29) |
| L [auth O] | SCOP2B Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2B (2022-06-29) |
| J [auth L] | SCOP2B Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2B (2022-06-29) |
| H [auth I] | SCOP2B Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2B (2022-06-29) |
| D [auth C] | SCOP2B Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2B (2022-06-29) |
| B [auth X] | SCOP2 Family | CI-2 family of serine protease inhibitors | 8105448 | 4001123 | SCOP2 (2022-06-29) |
| B [auth X] | SCOP2 Superfamily | CI-2 serine protease inhibitor-like | 8105449 | 3000827 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| O [auth T] | Trypsin_1 | e7al8T1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| M [auth Q] | Trypsin_1 | e7al8Q1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| K [auth N] | Trypsin_1 | e7al8N1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| I [auth K] | Trypsin_1 | e7al8K1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| G [auth H] | Trypsin_1 | e7al8H1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| E | Trypsin_1 | e7al8E1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| C [auth B] | Trypsin_1 | e7al8B1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| A [auth U] | Trypsin_1 | e7al8U1 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: FMN-binding split barrel 2 | F: Trypsin_1 | ECOD (1.6) |
| P [auth V] | potato_inhibit | e7al8V1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
| N [auth R] | potato_inhibit | e7al8R1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
| L [auth O] | potato_inhibit | e7al8O1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
| J [auth L] | potato_inhibit | e7al8L1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
| H [auth I] | potato_inhibit | e7al8I1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
| F | potato_inhibit | e7al8F1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
| D [auth C] | potato_inhibit | e7al8C1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
| B [auth X] | potato_inhibit | e7al8X1 | A: a+b two layers | X: CI-2 family of serine protease inhibitors-like | H: CI-2 family of serine protease inhibitors (From Topology) | T: CI-2 family of serine protease inhibitors | F: potato_inhibit | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| O [auth T] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
| M [auth Q] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
| K [auth N] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
| I [auth K] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
| G [auth H] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
| E | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
| C [auth B] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
| A [auth U] | 2.40.10.10 | Mainly Beta | Beta Barrel | Thrombin, subunit H | Trypsin-like serine proteases | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00089 | Trypsin (Trypsin) | Trypsin | Domain | ||
| PF00280 | Potato inhibitor I family (potato_inhibit) | Potato inhibitor I family | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009003 | Peptidase S1, PA clan | Homologous Superfamily | |
| IPR001314 | Peptidase S1A, chymotrypsin family | Family | |
| IPR033116 | Serine proteases, trypsin family, serine active site | Active Site | |
| IPR001254 | Serine proteases, trypsin domain | Domain | |
| IPR043504 | Peptidase S1, PA clan, chymotrypsin-like fold | Homologous Superfamily | |
| IPR050127 | Serine Proteases (Peptidase S1 Family) | Family | |
| IPR018114 | Serine proteases, trypsin family, histidine active site | Active Site | |
| IPR000864 | Proteinase inhibitor I13, potato inhibitor I | Family | |
| IPR036354 | Proteinase inhibitor I13, potato inhibitor I superfamily | Homologous Superfamily |














