6UHC | pdb_00006uhc

CryoEM structure of human Arp2/3 complex with bound NPFs


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
GSCOP2 FamilyArp2/3 complex 16 kDa subunit ARPC5 8093721 4002906 SCOP2 (2022-06-29)
GSCOP2 SuperfamilyArp2/3 complex 16 kDa subunit ARPC5 8093722 3001882 SCOP2 (2022-06-29)
FSCOP2 FamilyArp2/3 complex subunits 8093617 4003389 SCOP2 (2022-06-29)
FSCOP2 SuperfamilyArp2/3 complex subunits 8093618 3000751 SCOP2 (2022-06-29)
ESCOP2 FamilyArp2/3 complex 21 kDa subunit ARPC3 8093591 4002866 SCOP2 (2022-06-29)
ESCOP2 SuperfamilyArp2/3 complex 21 kDa subunit ARPC3 8093592 3001830 SCOP2 (2022-06-29)
CSCOP2 FamilyWD40-repeat 8094324 4002744 SCOP2 (2022-06-29)
CSCOP2 SuperfamilyWD40 repeat-like 8094325 3001694 SCOP2 (2022-06-29)
ASCOP2 FamilyActin/HSP70 8094240 4000313 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyActin-like ATPases 8094242 3000092 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyActin-like ATPases 8094241 3000092 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HtRNA-synt_1ee6uhcH01 A: a/b three-layered sandwichesX: Rossmann-likeH: all-alpha NTP pyrophosphatasesT: Hypothetical protein AF_0060F: tRNA-synt_1eECOD (v294.1)
GRNase_P_p30e6uhcG1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RNase_P_p30ECOD (v294.1)
FRNase_P_p30e6uhcF1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RNase_P_p30ECOD (v294.1)
ERNase_P_p30e6uhcE1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RNase_P_p30ECOD (v294.1)
DRNase_P_p30e6uhcD1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RNase_P_p30ECOD (v294.1)
CRNase_P_p30e6uhcC1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RNase_P_p30ECOD (v294.1)
BRNase_P_p30e6uhcB1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RNase_P_p30ECOD (v294.1)
ARNase_P_p30e6uhcA1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: RNase_P_p30ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF04045Arp2/3 complex, 34 kD subunit p34-Arc (P34-Arc)Arp2/3 complex, 34 kD subunit p34-Arc- Family
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF00022Actin (Actin)Actin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
H, I
Neural Wiskott-Aldrich syndrome protein
Actin-related protein 2/3 complex subunit 5
Actin-related protein 2/3 complex subunit 4
Actin-related protein 2/3 complex subunit 3
Actin-related protein 2/3 complex subunit 2
Actin-related protein 2/3 complex subunit 1B
Actin-related protein 2
Actin-related protein 3

InterPro: Protein Family Classification InterPro Database Homepage

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
PharosO15511
PharosP59998
PharosO15145
PharosO15144
PharosO15143
PharosP61160
PharosP61158