6POG
Crystal structure of the NELL2 EGF1-6-Robo3 FN1 complex
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF00041 | e6pogA1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00041 | ECOD (1.6) |
B | F_UNCLASSIFIED | e6pogB4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: F_UNCLASSIFIED | ECOD (1.6) |
B | PF07645 | e6pogB3 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: PF07645 | ECOD (1.6) |
B | PF07974,PF12947 | e6pogB1 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: PF07974,PF12947 | ECOD (1.6) |
B | PF07645 | e6pogB2 | A: few secondary structure elements | X: EGF-like | H: Fibulin-4 EGF-like 1 domain (From Topology) | T: Fibulin-4 EGF-like 1 domain | F: PF07645 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | - | Domain | |
PF07645 | Calcium-binding EGF domain (EGF_CA) | Calcium-binding EGF domain | - | Domain | |
PF12947 | EGF domain (EGF_3) | EGF domain | This family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein [1]. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
IPR003599 | Immunoglobulin subtype | Domain | |
IPR003598 | Immunoglobulin subtype 2 | Domain | |
IPR003961 | Fibronectin type III | Domain | |
IPR013783 | Immunoglobulin-like fold | Homologous Superfamily | |
IPR007110 | Immunoglobulin-like domain | Domain | |
IPR013098 | Immunoglobulin I-set | Domain | |
IPR036116 | Fibronectin type III superfamily | Homologous Superfamily | |
IPR024731 | EGF domain | Domain | |
IPR001791 | Laminin G domain | Domain | |
IPR018097 | EGF-like calcium-binding, conserved site | Conserved Site | |
IPR001007 | VWFC domain | Domain | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR009030 | Growth factor receptor cysteine-rich domain superfamily | Homologous Superfamily | |
IPR001881 | EGF-like calcium-binding domain | Domain | |
IPR048287 | Thrombospondin-like, N-terminal domain | Domain | |
IPR000742 | EGF-like domain | Domain | |
IPR000152 | EGF-type aspartate/asparagine hydroxylation site | PTM |