6POG | pdb_00006pog

Crystal structure of the NELL2 EGF1-6-Robo3 FN1 complex


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BEGF_CAe6pogB4 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: EGF_CAECOD (1.6)
BhEGF_2e6pogB1 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: hEGF_2ECOD (1.6)
BEGF_CA_1e6pogB3 A: few secondary structure elementsX: EGF-likeH: EGF-relatedT: EGF/LamininF: EGF_CA_1ECOD (1.6)
BEGF_CA_1e6pogB2 A: few secondary structure elementsX: EGF-likeH: Fibulin-4 EGF-like 1 domain (From Topology)T: Fibulin-4 EGF-like 1 domainF: EGF_CA_1ECOD (1.6)
Afn3e6pogA1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: fn3ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B2.10.25.10 Mainly Beta Ribbon Laminin LamininCATH (utative)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF07645Calcium-binding EGF domain (EGF_CA)Calcium-binding EGF domainDomain
PF12947EGF domain (EGF_3)EGF domainThis family includes a variety of EGF-like domain homologues. This family includes the C-terminal domain of the malaria parasite MSP1 protein [1]. Domain
PF00041Fibronectin type III domain (fn3)Fibronectin type III domainDomain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Protein kinase C-binding protein NELL2
Roundabout homolog 3