Annotations: 6MB2

Cryo-EM structure of the PYD filament of AIM2

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Z [auth k]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
Y [auth j]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
X [auth i]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
W [auth h]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
V [auth g]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
U [auth f]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
T [auth e]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
S [auth d]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
R [auth c]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
Q [auth b]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
P [auth a]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
DA [auth o]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
CA [auth n]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
BA [auth m]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)
AA [auth l]	SCOP2B Superfamily	GFP-like	8096046	3000576	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Z [auth k]	OB_NTP_bind	e6mb2k1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
Y [auth j]	OB_NTP_bind	e6mb2j1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
X [auth i]	OB_NTP_bind	e6mb2i1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
W [auth h]	OB_NTP_bind	e6mb2h1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
V [auth g]	OB_NTP_bind	e6mb2g1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
U [auth f]	OB_NTP_bind	e6mb2f1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
T [auth e]	OB_NTP_bind	e6mb2e1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
S [auth d]	OB_NTP_bind	e6mb2d1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
R [auth c]	OB_NTP_bind	e6mb2c1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
Q [auth b]	OB_NTP_bind	e6mb2b1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
P [auth a]	SBP_bac_1	e6mb2a1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: SBP_bac_1	ECOD (v295.2)
DA [auth o]	OB_NTP_bind	e6mb2o1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
CA [auth n]	OB_NTP_bind	e6mb2n1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
BA [auth m]	OB_NTP_bind	e6mb2m1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
AA [auth l]	OB_NTP_bind	e6mb2l1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
O	OB_NTP_bind	e6mb2O1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
N	OB_NTP_bind	e6mb2N1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
M	OB_NTP_bind	e6mb2M1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
L	OB_NTP_bind	e6mb2L1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
K	OB_NTP_bind	e6mb2K1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
J	OB_NTP_bind	e6mb2J1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
I	OB_NTP_bind	e6mb2I1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
H	OB_NTP_bind	e6mb2H1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
G	OB_NTP_bind	e6mb2G1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
F	OB_NTP_bind	e6mb2F1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
E	OB_NTP_bind	e6mb2E1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
D	OB_NTP_bind	e6mb2D1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
C	OB_NTP_bind	e6mb2C1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
B	OB_NTP_bind	e6mb2B1	A: alpha arrays	X: L-aspartase middle domain-like	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: OB_NTP_bind	ECOD (v295.2)
A	SBP_bac_1	e6mb2A1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: SBP_bac_1	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	PF02758	PAAD/DAPIN/Pyrin domain (PYRIN)	PAAD/DAPIN/Pyrin domain	This domain is predicted to contain 6 alpha helices and to have the same fold as the Pfam:PF00531 domain. This similarity may mean that this is a protein-protein interaction domain.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], Q [auth b], R [auth c], S [auth d], T [auth e], U [auth f], V [auth g], W [auth h], X [auth i], Y [auth j], Z [auth k]	Green fluorescent protein	-	bioluminescence metabolic process cellular process generation of precursor metabolites and energy	-
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	Interferon-inducible protein AIM2	protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity cysteine-type endopeptidase activator activity endopeptidase activator activity enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity endopeptidase regulator activity molecular transducer activity pattern recognition receptor activity protein-macromolecule adaptor activity molecular adaptor activity signaling adaptor activity cysteine-type endopeptidase activator activity endopeptidase activator activity enzyme regulator activity enzyme activator activity peptidase regulator activity molecular function activator activity molecular function regulator activity peptidase activator activity endopeptidase regulator activity molecular transducer activity pattern recognition receptor activity signaling receptor activity DNA binding double-stranded DNA binding binding nucleic acid binding identical protein binding protein binding	cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization pyroptosome complex assembly protein-containing complex assembly cellular component organization or biogenesis regulation of defense response cellular response to stimulus cellular response to stress response to stimulus DNA damage response response to stress cellular process cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization pyroptosome complex assembly protein-containing complex assembly cellular component organization or biogenesis regulation of defense response positive regulation of response to biotic stimulus regulation of response to biotic stimulus biological process involved in interspecies interaction between organisms regulation of response to external stimulus positive regulation of biological process response to biotic stimulus positive regulation of response to stimulus positive regulation of response to external stimulus positive regulation of immune response regulation of response to stress innate immune response regulation of immune system process response to external biotic stimulus positive regulation of immune system process regulation of biological process positive regulation of innate immune response defense response immune response response to other organism regulation of innate immune response biological regulation defense response to symbiont response to external stimulus regulation of response to stimulus immune system process defense response to other organism positive regulation of defense response activation of innate immune response regulation of immune response activation of immune response developmental process multicellular organismal process head development animal organ development brain development nervous system development multicellular organism development central nervous system development anatomical structure development animal gross anatomical part developmental process system development regulation of inflammatory response positive regulation of inflammatory response inflammatory response AIM2 inflammasome complex assembly multicellular organismal-level homeostasis leukocyte homeostasis T cell homeostasis homeostatic process homeostasis of number of cells lymphocyte homeostasis cellular response to interferon-beta response to peptide response to interferon-beta response to chemical response to cytokine cellular response to cytokine stimulus regulation of behavior behavior regulation of multicellular organismal process regulation of cellular process interleukin-1 production regulation of interleukin-1 beta production positive regulation of macromolecule biosynthetic process positive regulation of metabolic process positive regulation of interleukin-1 beta production positive regulation of biosynthetic process regulation of cytokine production cytokine production positive regulation of interleukin-1 production positive regulation of macromolecule metabolic process positive regulation of cellular process regulation of biosynthetic process regulation of interleukin-1 production regulation of macromolecule metabolic process gene expression macromolecule biosynthetic process regulation of gene expression biosynthetic process interleukin-1 beta production positive regulation of gene expression positive regulation of multicellular organismal process regulation of macromolecule biosynthetic process metabolic process macromolecule metabolic process positive regulation of cytokine production regulation of metabolic process pattern recognition receptor signaling pathway signaling cell communication immune response-activating signaling pathway immune response-regulating signaling pathway signal transduction innate immune response-activating signaling pathway regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of phosphatidylinositol 3-kinase/protein kinase B signal transduction negative regulation of biological process regulation of signal transduction intracellular signal transduction negative regulation of cell communication regulation of intracellular signal transduction intracellular signaling cassette negative regulation of cellular process regulation of signaling negative regulation of response to stimulus negative regulation of signal transduction regulation of cell communication phosphatidylinositol 3-kinase/protein kinase B signal transduction cell surface receptor signaling pathway cytokine-mediated signaling pathway cellular response to tumor necrosis factor tumor necrosis factor-mediated signaling pathway response to tumor necrosis factor regulation of defense response to virus defense response to virus positive regulation of defense response to virus by host regulation of defense response to virus by host response to virus cellular response to chemical stimulus cellular response to xenobiotic stimulus response to xenobiotic stimulus pyroptotic inflammatory response cellular homeostasis neuron cellular homeostasis	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol canonical inflammasome complex protein-containing complex AIM2 inflammasome complex nucleus membrane-enclosed lumen membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle cytosol canonical inflammasome complex protein-containing complex AIM2 inflammasome complex nucleus membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen site of double-strand break membraneless organelle site of DNA damage intracellular membraneless organelle chromosome

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], Q [auth b], R [auth c], S [auth d], T [auth e], U [auth f], V [auth g], W [auth h], X [auth i], Y [auth j], Z [auth k]	IPR000786	Green fluorescent protein, GFP	Family
AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], Q [auth b], R [auth c], S [auth d], T [auth e], U [auth f], V [auth g], W [auth h], X [auth i], Y [auth j], Z [auth k]	IPR011584	Green fluorescent protein-related	Family
AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], AA [auth l], BA [auth m], CA [auth n], DA [auth o], P [auth a], Q [auth b], R [auth c], S [auth d], T [auth e], U [auth f], V [auth g], W [auth h], X [auth i], Y [auth j], Z [auth k]	IPR009017	Green fluorescent protein	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR004021	HIN-200/IF120x	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR040205	HIN-200 family	Family
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR004020	DAPIN domain	Domain
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR011029	Death-like domain superfamily	Homologous Superfamily
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	IPR012340	Nucleic acid-binding, OB-fold	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C, D, E A, B, C, D, E, F, G, H, I, J, K, L, M, N, O	: O14862	psoriasis Sjogren syndrome ulcerative colitis B-cell chronic lymphocytic leukemia cystic fibrosis hepatocellular carcinoma invasive ductal breast carcinoma malignant ependymoma non-small cell lung carcinoma subependymal giant cell astrocytoma uterine corpus leiomyoma chronic obstructive pulmonary disease endometriosis IgA glomerulonephritis lung adenocarcinoma psoriasis Sjogren syndrome ulcerative colitis B-cell chronic lymphocytic leukemia cystic fibrosis hepatocellular carcinoma invasive ductal breast carcinoma malignant ependymoma non-small cell lung carcinoma subependymal giant cell astrocytoma uterine corpus leiomyoma chronic obstructive pulmonary disease endometriosis IgA glomerulonephritis lung adenocarcinoma MALT lymphoma ovarian cancer sarcoidosis tuberculosis cutaneous lupus erythematosus head and neck cancer interstitial cystitis lung cancer medulloblastoma pituitary cancer