6MB2 | pdb_00006mb2

Cryo-EM structure of the PYD filament of AIM2


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BA [auth m]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
Z [auth k]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
Y [auth j]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
X [auth i]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
W [auth h]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
V [auth g]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
U [auth f]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
T [auth e]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
S [auth d]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
R [auth c]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
Q [auth b]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
P [auth a]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
DA [auth o]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
CA [auth n]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)
AA [auth l]SCOP2B SuperfamilyGFP-like 8096046 3000576 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BA [auth m]e6mb2m1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Z [auth k]e6mb2k1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Y [auth j]e6mb2j1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
X [auth i]e6mb2i1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
W [auth h]e6mb2h1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
V [auth g]e6mb2g1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
U [auth f]e6mb2f1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
T [auth e]e6mb2e1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
S [auth d]e6mb2d1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
R [auth c]e6mb2c1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Q [auth b]e6mb2b1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
P [auth a]e6mb2a1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: NanEF:ECOD (20:10:01)
DA [auth o]e6mb2o1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
CA [auth n]e6mb2n1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
AA [auth l]e6mb2l1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Ge6mb2G1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Oe6mb2O1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Ne6mb2N1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Me6mb2M1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Le6mb2L1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Ke6mb2K1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Je6mb2J1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Ie6mb2I1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
He6mb2H1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Fe6mb2F1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Ee6mb2E1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
De6mb2D1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Ce6mb2C1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Be6mb2B1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)
Ae6mb2A1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: NanEF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF02758PAAD/DAPIN/Pyrin domain (PYRIN)PAAD/DAPIN/Pyrin domainThis domain is predicted to contain 6 alpha helices and to have the same fold as the Pfam:PF00531 domain. This similarity may mean that this is a protein-protein interaction domain. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Green fluorescent protein- -
A, B, C, D, E
Interferon-inducible protein AIM2