Near-atomic resolution structure of a plant geminivirus determined by electron cryo-microscopy.
External Resource: Annotation
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| ZC [auth BV] | AAA_lid_3 | e6ek5BV1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| ZB [auth BN] | AAA_lid_3 | e6ek5BN1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| ZA [auth z] | AAA_lid_3 | e6ek5z1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| Z | AAA_lid_3 | e6ek5Z1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| YC [auth BQ] | AAA_lid_3 | e6ek5BQ1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| YB [auth BM] | AAA_lid_3 | e6ek5BM1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| YA [auth y] | AAA_lid_3 | e6ek5y1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| Y | AAA_lid_3 | e6ek5Y1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| XC [auth BH] | AAA_lid_3 | e6ek5BH1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| XB [auth BL] | AAA_lid_3 | e6ek5BL1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| XA [auth x] | AAA_lid_3 | e6ek5x1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| X | AAA_lid_3 | e6ek5X1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| WC [auth Bw] | AAA_lid_3 | e6ek5Bw1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| WB [auth BK] | AAA_lid_3 | e6ek5BK1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| WA [auth u] | AAA_lid_3 | e6ek5u1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| W | AAA_lid_3 | e6ek5W1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| VC [auth B2] | AAA_lid_3 | e6ek5B21 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| VB [auth Bd] | AAA_lid_3 | e6ek5Bd1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| VA [auth t] | AAA_lid_3 | e6ek5t1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| V | AAA_lid_3 | e6ek5V1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| UC [auth B1] | AAA_lid_3 | e6ek5B11 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| UB [auth Bc] | AAA_lid_3 | e6ek5Bc1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| UA [auth s] | AAA_lid_3 | e6ek5s1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| U | AAA_lid_3 | e6ek5U1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| TC [auth B3] | AAA_lid_3 | e6ek5B31 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| TB [auth Bb] | AAA_lid_3 | e6ek5Bb1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| TA [auth r] | AAA_lid_3 | e6ek5r1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| T | AAA_lid_3 | e6ek5T1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| SC [auth Bz] | AAA_lid_3 | e6ek5Bz1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| SB [auth Ba] | AAA_lid_3 | e6ek5Ba1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| SA [auth q] | AAA_lid_3 | e6ek5q1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| S | AAA_lid_3 | e6ek5S1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| RC [auth By] | AAA_lid_3 | e6ek5By1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| RB [auth BZ] | AAA_lid_3 | e6ek5BZ1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| RA [auth p] | AAA_lid_3 | e6ek5p1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| R | AAA_lid_3 | e6ek5R1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| QC [auth Bx] | AAA_lid_3 | e6ek5Bx1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| QB [auth BY] | AAA_lid_3 | e6ek5BY1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| QA [auth o] | AAA_lid_3 | e6ek5o1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| Q | AAA_lid_3 | e6ek5Q1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| PC [auth Bu] | AAA_lid_3 | e6ek5Bu1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| PB [auth BX] | AAA_lid_3 | e6ek5BX1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| PA [auth n] | AAA_lid_3 | e6ek5n1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| P | AAA_lid_3 | e6ek5P1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| OC [auth Bt] | AAA_lid_3 | e6ek5Bt1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| OB [auth BU] | AAA_lid_3 | e6ek5BU1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| OA [auth m] | AAA_lid_3 | e6ek5m1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| O | AAA_lid_3 | e6ek5O1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| NC [auth Bs] | AAA_lid_3 | e6ek5Bs1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| NB [auth BT] | AAA_lid_3 | e6ek5BT1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| NA [auth j] | AAA_lid_3 | e6ek5j1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| N | AAA_lid_3 | e6ek5N1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| MC [auth Br] | AAA_lid_3 | e6ek5Br1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| MB [auth BS] | AAA_lid_3 | e6ek5BS1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| MA [auth i] | AAA_lid_3 | e6ek5i1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| M | AAA_lid_3 | e6ek5M1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| LC [auth Bq] | AAA_lid_3 | e6ek5Bq1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| LB [auth BP] | AAA_lid_3 | e6ek5BP1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| LA [auth h] | AAA_lid_3 | e6ek5h1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| L | AAA_lid_3 | e6ek5L1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| KC [auth Bp] | AAA_lid_3 | e6ek5Bp1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| KB [auth BJ] | AAA_lid_3 | e6ek5BJ1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| KA [auth g] | AAA_lid_3 | e6ek5g1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| K | AAA_lid_3 | e6ek5K1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| JC [auth Bo] | AAA_lid_3 | e6ek5Bo1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| JB [auth BG] | AAA_lid_3 | e6ek5BG1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| JA [auth f] | AAA_lid_3 | e6ek5f1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| J | AAA_lid_3 | e6ek5J1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| IC [auth Bn] | AAA_lid_3 | e6ek5Bn1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| IB [auth BF] | AAA_lid_3 | e6ek5BF1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| IA [auth e] | AAA_lid_3 | e6ek5e1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| I | AAA_lid_3 | e6ek5I1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| HC [auth Bm] | AAA_lid_3 | e6ek5Bm1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| HB [auth BE] | AAA_lid_3 | e6ek5BE1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| HA [auth d] | AAA_lid_3 | e6ek5d1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| H | AAA_lid_3 | e6ek5H1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| GC [auth Bj] | AAA_lid_3 | e6ek5Bj1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| GB [auth v] | AAA_lid_3 | e6ek5v1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| GA [auth c] | AAA_lid_3 | e6ek5c1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| G | AAA_lid_3 | e6ek5G1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| FD [auth Bl] | AAA_lid_3 | e6ek5Bl1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| FC [auth Bi] | AAA_lid_3 | e6ek5Bi1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| FB [auth l] | AAA_lid_3 | e6ek5l1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| FA [auth b] | AAA_lid_3 | e6ek5b1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| F | AAA_lid_3 | e6ek5F1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| ED [auth BW] | AAA_lid_3 | e6ek5BW1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| EC [auth Bh] | AAA_lid_3 | e6ek5Bh1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| EB [auth w] | AAA_lid_3 | e6ek5w1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| EA [auth a] | AAA_lid_3 | e6ek5a1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| E | AAA_lid_3 | e6ek5E1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| DD [auth BR] | AAA_lid_3 | e6ek5BR1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| DC [auth Bg] | AAA_lid_3 | e6ek5Bg1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| DB [auth k] | AAA_lid_3 | e6ek5k1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| DA [auth BD] | AAA_lid_3 | e6ek5BD1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| D | AAA_lid_3 | e6ek5D1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| CD [auth BI] | AAA_lid_3 | e6ek5BI1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| CC [auth Bf] | AAA_lid_3 | e6ek5Bf1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| CB [auth 2] | AAA_lid_3 | e6ek521 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| CA [auth BC] | AAA_lid_3 | e6ek5BC1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| C | AAA_lid_3 | e6ek5C1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| BD [auth Bv] | AAA_lid_3 | e6ek5Bv1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| BC [auth Be] | AAA_lid_3 | e6ek5Be1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| BB [auth 1] | AAA_lid_3 | e6ek511 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| BA [auth BB] | AAA_lid_3 | e6ek5BB1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| B | AAA_lid_3 | e6ek5B1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| AD [auth Bk] | AAA_lid_3 | e6ek5Bk1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| AC [auth BO] | AAA_lid_3 | e6ek5BO1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| AB [auth 3] | AAA_lid_3 | e6ek531 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| AA [auth BA] | AAA_lid_3 | e6ek5BA1 | A: alpha arrays | X: HTH | H: HTH | T: Three-helical HTH | F: AAA_lid_3 | ECOD (v295) |
| A | BRF1 | e6ek5A01 | A: alpha arrays | X: Ribonuclease H-like | H: P-loop domains-related | T: P-loop containing nucleoside triphosphate hydrolases | F: BRF1 | ECOD (v295) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR000263 | Geminivirus AR1/BR1 coat protein | Family | |
| IPR029053 | Viral coat protein subunit | Homologous Superfamily | |
| IPR000650 | Geminivirus AR1 coat protein | Family |














