6EBZ
Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus urinae in Activated Form with Thiocyanate Bound
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6ebza_ | All alpha proteins | Ferritin-like | Ferritin-like | automated matches | automated matches | (Aerococcus sp. Group 1 ) [TaxId: 2976812 ], | SCOPe (2.08) |
B | d6ebzb_ | All alpha proteins | Ferritin-like | Ferritin-like | automated matches | automated matches | (Aerococcus sp. Group 1 ) [TaxId: 2976812 ], | SCOPe (2.08) |
C | d6ebzc_ | All alpha proteins | Ferritin-like | Ferritin-like | automated matches | automated matches | (Aerococcus sp. Group 1 ) [TaxId: 2976812 ], | SCOPe (2.08) |
D | d6ebzd_ | All alpha proteins | Ferritin-like | Ferritin-like | automated matches | automated matches | (Aerococcus sp. Group 1 ) [TaxId: 2976812 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ferritin-like | 8066780 | 3001658 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Ferritin-like | 8066780 | 3001658 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Ferritin-like | 8066780 | 3001658 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Ferritin-like | 8066780 | 3001658 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Ribonuc_red_sm | e6ebzA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
B | Ribonuc_red_sm | e6ebzB1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
C | Ribonuc_red_sm | e6ebzC1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
D | Ribonuc_red_sm | e6ebzD1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ribonuc_red_sm | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (utative) |
B | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (utative) |
C | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (utative) |
D | 1.10.620.20 | Mainly Alpha | Orthogonal Bundle | Ribonucleotide Reductase, subunit A | Ribonucleotide Reductase, subunit A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR026494 | Ribonucleoside-diphosphate reductase subunit beta | Family | |
IPR000358 | Ribonucleotide reductase small subunit family | Family | |
IPR033909 | Ribonucleotide reductase small subunit | Family | |
IPR012348 | Ribonucleotide reductase-like | Homologous Superfamily |