6D7K
Complex structure of Methane monooxygenase hydroxylase in complex with inhibitory subunit
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d6d7ka_ | All alpha proteins | Ferritin-like | Ferritin-like | Ribonucleotide reductase-like | automated matches | (Methylosinus sporium ) [TaxId: 428 ], | SCOPe (2.08) |
E | d6d7ke_ | All alpha proteins | Ferritin-like | Ferritin-like | Ribonucleotide reductase-like | automated matches | (Methylosinus sporium ) [TaxId: 428 ], | SCOPe (2.08) |
C | d6d7kc_ | All alpha proteins | Open three-helical up-and-down bundle | Methane monooxygenase hydrolase, gamma subunit | Methane monooxygenase hydrolase, gamma subunit | automated matches | (Methylosinus sporium ) [TaxId: 428 ], | SCOPe (2.08) |
G | d6d7kg_ | All alpha proteins | Open three-helical up-and-down bundle | Methane monooxygenase hydrolase, gamma subunit | Methane monooxygenase hydrolase, gamma subunit | automated matches | (Methylosinus sporium ) [TaxId: 428 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Ferritin-like | 8094323 | 3001658 | SCOP2B (2022-06-29) |
E | SCOP2 Family | Ribonucleotide reductase-like | 8094322 | 4000846 | SCOP2 (2022-06-29) |
E | SCOP2 Superfamily | Ferritin-like | 8094323 | 3001658 | SCOP2 (2022-06-29) |
B | SCOP2B Superfamily | Ferritin-like | 8099254 | 3001658 | SCOP2B (2022-06-29) |
F | SCOP2 Family | Ribonucleotide reductase-like | 8099253 | 4000846 | SCOP2 (2022-06-29) |
F | SCOP2 Superfamily | Ferritin-like | 8099254 | 3001658 | SCOP2 (2022-06-29) |
C | SCOP2B Superfamily | Methane monooxygenase hydrolase gamma subunit | 8094437 | 3001468 | SCOP2B (2022-06-29) |
G | SCOP2 Family | Methane monooxygenase hydrolase gamma subunit | 8094436 | 4000804 | SCOP2 (2022-06-29) |
G | SCOP2 Superfamily | Methane monooxygenase hydrolase gamma subunit | 8094437 | 3001468 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | F_UNCLASSIFIED | e6d7kD1 | A: a+b two layers | X: Methane monooxygenase hydroxylase, MmoD (From Topology) | H: Methane monooxygenase hydroxylase, MmoD (From Topology) | T: Methane monooxygenase hydroxylase, MmoD | F: F_UNCLASSIFIED | ECOD (1.6) |
H | F_UNCLASSIFIED | e6d7kH1 | A: a+b two layers | X: Methane monooxygenase hydroxylase, MmoD (From Topology) | H: Methane monooxygenase hydroxylase, MmoD (From Topology) | T: Methane monooxygenase hydroxylase, MmoD | F: F_UNCLASSIFIED | ECOD (1.6) |
A | PF02332 | e6d7kA1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: PF02332 | ECOD (1.6) |
E | PF02332 | e6d7kE1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: PF02332 | ECOD (1.6) |
B | PF02332 | e6d7kB1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: PF02332 | ECOD (1.6) |
F | PF02332 | e6d7kF1 | A: alpha bundles | X: Ferritin/Heme oxygenase/4-helical cytokines | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: PF02332 | ECOD (1.6) |
C | PF02964 | e6d7kC1 | A: alpha arrays | X: Methane monooxygenase hydrolase gamma subunit-like | H: Methane monooxygenase hydrolase gamma subunit (From Topology) | T: Methane monooxygenase hydrolase gamma subunit | F: PF02964 | ECOD (1.6) |
G | PF02964 | e6d7kG1 | A: alpha arrays | X: Methane monooxygenase hydrolase gamma subunit-like | H: Methane monooxygenase hydrolase gamma subunit (From Topology) | T: Methane monooxygenase hydrolase gamma subunit | F: PF02964 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02332 | Methane/Phenol/Alkene Hydroxylase (Phenol_Hydrox) | Methane/Phenol/Alkene Hydroxylase | This protein family includes several components of multicomponent enzyme systems predominantly found in Proteobacteria and Actinobacteria, including subunits alpha and beta of a methane monooxygenase and an alkene monooxygenase system, small and larg ... | Domain | |
PF02332 | Methane/Phenol/Alkene Hydroxylase (Phenol_Hydrox) | Methane/Phenol/Alkene Hydroxylase | This protein family includes several components of multicomponent enzyme systems predominantly found in Proteobacteria and Actinobacteria, including subunits alpha and beta of a methane monooxygenase and an alkene monooxygenase system, small and larg ... | Domain | |
PF02964 | Methane monooxygenase, hydrolase gamma chain (MeMO_Hyd_G) | Methane monooxygenase, hydrolase gamma chain | - | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
Methane monooxygenase hydroxylase, MmoD | - | - | ||
Methane monooxygenase hydroxylase, MmoX1 | - | - | ||
Methane monooxygenase hydroxylase, MmoY |
| - | - | |
Methane monooxygenase hydroxylase, MmoZ |
| - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR017256 | Methane monooxygenase component D | Family | |
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR003430 | Propane/methane/phenol/toluene hydroxylase | Family | |
IPR012348 | Ribonucleotide reductase-like | Homologous Superfamily | |
IPR009078 | Ferritin-like superfamily | Homologous Superfamily | |
IPR003430 | Propane/methane/phenol/toluene hydroxylase | Family | |
IPR012078 | Methane/phenol monooxygenase, hydroxylase component | Family | |
IPR012348 | Ribonucleotide reductase-like | Homologous Superfamily | |
IPR015952 | Methane monooxygenase, gamma chain, domain 1 | Homologous Superfamily | |
IPR015953 | Methane monooxygenase, gamma chain, domain 2 | Homologous Superfamily | |
IPR036123 | Methane monooxygenase, gamma chain superfamily | Homologous Superfamily | |
IPR004222 | Methane monooxygenase, gamma chain | Family |