6ZRK
Crystal structure of H8 haemagglutinin
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | d6zrkc1 | All beta proteins | Viral protein domain | Viral protein domain | automated matches | automated matches | (Influenza A virus (A/blue-winged teal/Guatemala/CIP049-14/2010(H8N4)) ) [TaxId: 1074858 ], | SCOPe (2.08) |
A [auth C] | d6zrkc2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Influenza A virus (A/blue-winged teal/Guatemala/CIP049-14/2010(H8N4)) ) [TaxId: 1074858 ], | SCOPe (2.08) |
B [auth D] | d6zrkd_ | Coiled coil proteins | Stalk segment of viral fusion proteins | Influenza hemagglutinin (stalk) | automated matches | automated matches | (Influenza A virus ) [TaxId: 11320 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth C] | SCOP2 Family | Influenza hemagglutinin headpiece | 8102081 | 4002506 | SCOP2 (2022-06-29) |
A [auth C] | SCOP2 Superfamily | Influenza hemagglutinin domain-like | 8102082 | 3001342 | SCOP2 (2022-06-29) |
B [auth D] | SCOP2 Family | Influenza hemagglutinin (stalk) | 8102025 | 4003840 | SCOP2 (2022-06-29) |
B [auth D] | SCOP2 Superfamily | Influenza hemagglutinin (stalk) | 8102026 | 3001616 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth C] | PF00509 | e6zrkC1 | A: beta sandwiches | X: jelly-roll | H: Viral protein domain (From Topology) | T: Viral protein domain | F: PF00509 | ECOD (1.6) |
B [auth D] | PF00509 | e6zrkD1 | A: alpha bundles | X: Hemagglutinin HA2 chain (From Topology) | H: Hemagglutinin HA2 chain (From Topology) | T: Hemagglutinin HA2 chain | F: PF00509 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth C] | PF00509 | Haemagglutinin (Hemagglutinin) | Haemagglutinin | - | Family |
B [auth D] | PF00509 | Haemagglutinin (Hemagglutinin) | Haemagglutinin | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth C] | IPR001364 | Haemagglutinin, influenzavirus A/B | Family |
A [auth C] | IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily |
A [auth C] | IPR000149 | Haemagglutinin, influenzavirus A | Family |
A [auth C] | IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |
B [auth D] | IPR001364 | Haemagglutinin, influenzavirus A/B | Family |
B [auth D] | IPR008980 | Viral capsid/haemagglutinin protein | Homologous Superfamily |
B [auth D] | IPR000149 | Haemagglutinin, influenzavirus A | Family |
B [auth D] | IPR013828 | Haemagglutinin, HA1 chain, alpha/beta domain superfamily | Homologous Superfamily |