6Z7N | pdb_00006z7n

The atomic structure of HAdV-F41 at pH 7.4


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Y [auth O]WD40e6z7nO1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
W [auth M]WD40e6z7nM1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
V [auth L]WD40e6z7nL1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
U [auth K]WD40e6z7nK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
T [auth J]WD40e6z7nJ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
S [auth I]WD40e6z7nI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
R [auth H]WD40e6z7nH1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
Q [auth G]WD40e6z7nG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
P [auth F]WD40e6z7nF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
O [auth E]WD40e6z7nE1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
N [auth D]WD40e6z7nD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
M [auth C]WD40e6z7nC1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
L [auth B]WD40e6z7nB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)
K [auth A]WD40e6z7nA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: WD40ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
W [auth M]PF01686Adenovirus penton base protein (Adeno_Penton_B)Adenovirus penton base protein- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
GA [auth W],
HA [auth V],
JA [auth Z]
Unknown---
FA [auth X]Fiber protein---
DA [auth T],
EA [auth U]
Pre-hexon-linking protein VIII -
AA [auth Q],
BA [auth R],
CA [auth S],
Z [auth P]
Hexon-interlacing protein
Y [auth O]Pre-hexon-linking protein IIIa- -
X [auth N]Core-capsid bridging protein
W [auth M]Penton protein
Hexon protein
IA [auth Y]Unknown---
Pre-protein VI-

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
DA [auth T],
EA [auth U]
IPR000646Pre-hexon-linking protein VIIIFamily
AA [auth Q],
BA [auth R],
CA [auth S],
Z [auth P]
IPR005641Hexon-associated protein IXFamily
Y [auth O]IPR003479Pre-hexon-linking protein IIIaFamily
Y [auth O]IPR043053Pre-hexon-linking protein IIIa, N-terminalHomologous Superfamily
X [auth N]IPR005608Adenovirus core-capsid bridging protein VFamily
W [auth M]IPR002605Adenovirus penton base proteinFamily
IPR044942Adenovirus Pll, hexon, subdomain 2Homologous Superfamily
IPR016110Adenovirus Pll, hexon, subdomain 3Homologous Superfamily
IPR016107Adenovirus Pll, hexon, N-terminalDomain
IPR016108Adenovirus Pll, hexon, C-terminalDomain
IPR016112Group II dsDNA virus coat/capsid proteinHomologous Superfamily
IPR037542Adenovirus hexon proteinFamily
IPR004243Minor capsid protein VIFamily