Crystal Structure of a Ternary MEF2 Chimera/NKX2-5/myocardin enhancer DNA Complex


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
OSCOP2B SuperfamilyHomeodomain-like 8071006 3000001 SCOP2B (2022-06-29)
NSCOP2B SuperfamilyHomeodomain-like 8071006 3000001 SCOP2B (2022-06-29)
MSCOP2B SuperfamilyHomeodomain-like 8071006 3000001 SCOP2B (2022-06-29)
JSCOP2B SuperfamilySRF-like 8035395 3001928 SCOP2B (2022-06-29)
ISCOP2B SuperfamilySRF-like 8035395 3001928 SCOP2B (2022-06-29)
DSCOP2B SuperfamilySRF-like 8035395 3001928 SCOP2B (2022-06-29)
CSCOP2B SuperfamilySRF-like 8035395 3001928 SCOP2B (2022-06-29)
BSCOP2B SuperfamilySRF-like 8035395 3001928 SCOP2B (2022-06-29)
ASCOP2B SuperfamilySRF-like 8035395 3001928 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
OLdh_1_Ce6wc2O1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)
NLdh_1_Ce6wc2N1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)
MLdh_1_Ce6wc2M1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)
JLdh_1_Ce6wc2J1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)
ILdh_1_Ce6wc2I1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)
DCSDe6wc2D1 A: beta barrelsX: Tail specific protease helical domainH: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesT: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetasesF: CSDECOD (v294.2)
CLdh_1_Ce6wc2C1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)
BLdh_1_Ce6wc2B1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)
ALdh_1_Ce6wc2A1 A: beta barrelsX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Ldh_1_CECOD (v294.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, I
PF00319SRF-type transcription factor (DNA-binding and dimerisation domain) (SRF-TF)SRF-type transcription factor (DNA-binding and dimerisation domain)Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
M, N, O
Homeobox protein Nkx-2.5
F, H, L
Myocardin Enhancer DNA---
E, G, K
Myocardin Enhancer DNA---
A, B, C, D, I
MEF2 Chimera,Myocyte-specific enhancer factor 2B,Myocyte-specific enhancer factor 2A

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
M, N, O
P52952
A, B, C, D, I
Q02080