Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
CSCOP2B SuperfamilyWD40 repeat-like8085897 3001694 SCOP2B (2022-06-29)
FSCOP2B SuperfamilyArp2/3 complex subunits8085061 3000751 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
ISCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
JSCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)
KSCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyActin-like ATPases8040509 3000092 SCOP2B (2022-06-29)
LSCOP2B SuperfamilyActin-like ATPases8040506 3000092 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00022e6w17A1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
BPF00022e6w17B1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
CPF00400e6w17C1 A: beta duplicates or obligate multimersX: beta-propeller-likeH: beta-propellerT: 7-bladedF: PF00400ECOD (1.6)
DPF04045e6w17D2 A: a+b two layersX: Type III secretory system chaperone-likeH: Arp2/3 complex subunits (From Topology)T: Arp2/3 complex subunitsF: PF04045ECOD (1.6)
EPF04062e6w17E1 A: alpha bundlesX: Arp2/3 complex 21 kDa subunit ARPC3 (From Topology)H: Arp2/3 complex 21 kDa subunit ARPC3 (From Topology)T: Arp2/3 complex 21 kDa subunit ARPC3F: PF04062ECOD (1.6)
FPF05856e6w17F1 A: a+b two layersX: Type III secretory system chaperone-likeH: Arp2/3 complex subunits (From Topology)T: Arp2/3 complex subunitsF: PF05856ECOD (1.6)
GPF04699e6w17G1 A: alpha superhelicesX: Repetitive alpha hairpinsH: Arp2/3 complex 16 KDa subunit ARPC5 (From Topology)T: Arp2/3 complex 16 KDa subunit ARPC5F: PF04699ECOD (1.6)
IPF00022e6w17I2 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
JPF00022e6w17J1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
KPF00022e6w17K1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)
LPF00022e6w17L1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: PF00022ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00022Actin (Actin)Actin- Family
PF00022Actin (Actin)Actin- Family
PF00400WD domain, G-beta repeat (WD40)WD domain, G-beta repeat- Repeat
PF04045Arp2/3 complex, 34 kD subunit p34-Arc (P34-Arc)Arp2/3 complex, 34 kD subunit p34-Arc- Family
PF04062ARP2/3 complex ARPC3 (21 kDa) subunit (P21-Arc)ARP2/3 complex ARPC3 (21 kDa) subunit- Family
PF05856ARP2/3 complex 20 kDa subunit (ARPC4) (ARPC4)ARP2/3 complex 20 kDa subunit (ARPC4)- Family
PF04699ARP2/3 complex 16 kDa subunit (p16-Arc) (P16-Arc)ARP2/3 complex 16 kDa subunit (p16-Arc)The Arp2/3 protein complex has been implicated in the control of actin polymerisation. The human complex consists of seven subunits which include the actin related proteins Arp2 and Arp3, and five others referred to as p41-Arc, p34-Arc, p21-Arc, p20 ...The Arp2/3 protein complex has been implicated in the control of actin polymerisation. The human complex consists of seven subunits which include the actin related proteins Arp2 and Arp3, and five others referred to as p41-Arc, p34-Arc, p21-Arc, p20-Arc, and p16-Arc. The precise function of p16-Arc is currently unknown. Its structure consists of a single domain containing a bundle of seven alpha helices [1,2].
Domain
PF09431SPIN90/Ldb17, leucine-rich domain (SPIN90_LRD)SPIN90/Ldb17, leucine-rich domainThis is the conserved leucine-rich domain (LRD) within the C-terminal domain of SPIN90 (also known as NCK interacting protein with SH3 domain (NCKIPSD)) from animals, Ldb17 from budding yeasts and Dip1 from fission yeasts [1]. Ldb17 is involved in th ...This is the conserved leucine-rich domain (LRD) within the C-terminal domain of SPIN90 (also known as NCK interacting protein with SH3 domain (NCKIPSD)) from animals, Ldb17 from budding yeasts and Dip1 from fission yeasts [1]. Ldb17 is involved in the regulation of endocytosis in yeast [2]. SPIN90 is an F-actin binding protein that regulates actin polymerization and endocytosis [3]. It associates with and activates the Arp2/3 complex, without requiring a preformed actin filament [2,4,5]. This LRD, within the C-terminal armadillo repeat (ARM) domain of SPIN90, is important for activation of Arp2/3 complex [1].
Domain
I, J, K, L
PF00022Actin (Actin)Actin- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Actin-related protein 3
Actin-related protein 2
Actin-related protein 2/3 complex subunit 1
Actin-related protein 2/3 complex subunit 2
Actin-related protein 2/3 complex subunit 3
Actin-related protein 2/3 complex subunit 4
Actin-related protein 2/3 complex subunit 5
Protein dip1
I, J, K, L
Actin, alpha skeletal muscle
M, N, O, P, Q
Phalloidin - -

InterPro: Protein Family Classification InterPro Database Homepage

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
I, J, K, L
HIC Parent Component: HIS

RESIDAA0317

PSI-MOD :  1'-methyl-L-histidine MOD:00322
M, N, O, P, Q
ALO Parent Component: THR

RESIDAA0317

M, N, O, P, Q
G5G Parent Component: LEU

RESIDAA0317

M, N, O, P, Q
HYP Parent Component: PRO

RESIDAA0317 , AA0030

PSI-MOD :  1'-methyl-L-histidine MOD:00322 , 4-hydroxy-L-proline MOD:00039