6W09
Human mAbs broadly protect against infection of arthritiogenic alphaviruses by recognizing conserved elements of the MXR8 receptor binding domain
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF01589 | e6w09A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF01589 | ECOD (1.6) |
A | PF01589 | e6w09A2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: PF01589 | ECOD (1.6) |
B | PF01589 | e6w09B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF01589 | ECOD (1.6) |
B | PF01589 | e6w09B2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: PF01589 | ECOD (1.6) |
C | PF01589 | e6w09C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF01589 | ECOD (1.6) |
C | PF01589 | e6w09C2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: PF01589 | ECOD (1.6) |
D | PF01589 | e6w09D1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF01589 | ECOD (1.6) |
D | PF01589 | e6w09D2 | A: beta complex topology | X: Viral glycoprotein, central and dimerisation domains-like | H: Viral glycoprotein, central and dimerisation domains (From Topology) | T: Viral glycoprotein, central and dimerisation domains | F: PF01589 | ECOD (1.6) |
E | PF00943 | e6w09E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00943 | ECOD (1.6) |
F | PF00943 | e6w09F1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00943 | ECOD (1.6) |
G | PF00943 | e6w09G3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00943 | ECOD (1.6) |
H | PF00943 | e6w09H3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF00943 | ECOD (1.6) |
I | PF07654 | e6w09I2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
I | PF07686 | e6w09I1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
K [auth J] | PF07654 | e6w09J2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
K [auth J] | PF07686 | e6w09J1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
M [auth K] | PF07654 | e6w09K1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
M [auth K] | PF07686 | e6w09K2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
O [auth L] | PF07654 | e6w09L1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
O [auth L] | PF07686 | e6w09L2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
J [auth M] | PF07654 | e6w09M1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
J [auth M] | PF07686 | e6w09M2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
L [auth N] | PF07654 | e6w09N1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
L [auth N] | PF07686 | e6w09N2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
N [auth O] | PF07654 | e6w09O1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
N [auth O] | PF07686 | e6w09O2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
P | PF07654 | e6w09P1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07654 | ECOD (1.6) |
P | PF07686 | e6w09P2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: PF07686 | ECOD (1.6) |
Q | PF01563 | e6w09Q1 | A: a+b two layers | X: Glycoprotein E3 (From Topology) | H: Glycoprotein E3 (From Topology) | T: Glycoprotein E3 | F: PF01563 | ECOD (1.6) |
R | PF01563 | e6w09R1 | A: a+b two layers | X: Glycoprotein E3 (From Topology) | H: Glycoprotein E3 (From Topology) | T: Glycoprotein E3 | F: PF01563 | ECOD (1.6) |
S | PF01563 | e6w09S1 | A: a+b two layers | X: Glycoprotein E3 (From Topology) | H: Glycoprotein E3 (From Topology) | T: Glycoprotein E3 | F: PF01563 | ECOD (1.6) |
T | PF01563 | e6w09T1 | A: a+b two layers | X: Glycoprotein E3 (From Topology) | H: Glycoprotein E3 (From Topology) | T: Glycoprotein E3 | F: PF01563 | ECOD (1.6) |
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
I, K [auth J], M [auth K], O [auth L] | mAb CHK-265, broadly protect against arthritogenic alphaviruses | VH-CH1 | Mus musculus (house mouse) | IGHV9-1*01, IGHJ2*01, IGHG2C*01, IGHG2C*02, IGHG2C*03 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-1_LAMBDA | IMGT (202416-0) |
J [auth M], L [auth N], N [auth O], P | mAb CHK-265, broadly protect against arthritogenic alphaviruses | L-LAMBDA | Mus musculus (house mouse) | IGLV1*01, IGLJ1*01, IGLC1*01 | V-DOMAIN V-LAMBDA, C-DOMAIN C-LAMBDA | IG | FAB-GAMMA-1_LAMBDA | IMGT (202416-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
---|---|---|---|---|---|
I, K [auth J], M [auth K], O [auth L] | Heavy Chain | IGHV9 | - | e2 glycoprotein | SAbDab (2024-04-26) |
J [auth M], L [auth N], N [auth O], P | Light Chain | IGLV1 | Lambda | e2 glycoprotein | SAbDab (2024-04-26) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01589 | Alphavirus E1 glycoprotein (Alpha_E1_glycop) | Alphavirus E1 glycoprotein | - | Family | |
PF00943 | Alphavirus E2 glycoprotein (Alpha_E2_glycop) | Alphavirus E2 glycoprotein | - | Family | |
PF01563 | Alphavirus E3 glycoprotein (Alpha_E3_glycop) | Alphavirus E3 glycoprotein | - | Family |