6T4B
CRYSTAL STRUCTURE OF HUMAN TDP-43 N-TERMINAL DOMAIN AT 2.55 A RESOLUTION
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PF18694 | e6t4bA1 | A: a+b two layers | X: beta-Grasp | H: TAR DNA-binding protein 43 N-terminal domain (From Topology) | T: TAR DNA-binding protein 43 N-terminal domain | F: PF18694 | ECOD (1.6) |
B [auth C] | PF18694 | e6t4bC1 | A: a+b two layers | X: beta-Grasp | H: TAR DNA-binding protein 43 N-terminal domain (From Topology) | T: TAR DNA-binding protein 43 N-terminal domain | F: PF18694 | ECOD (1.6) |
C [auth E] | PF18694 | e6t4bE1 | A: a+b two layers | X: beta-Grasp | H: TAR DNA-binding protein 43 N-terminal domain (From Topology) | T: TAR DNA-binding protein 43 N-terminal domain | F: PF18694 | ECOD (1.6) |
D [auth G] | PF18694 | e6t4bG1 | A: a+b two layers | X: beta-Grasp | H: TAR DNA-binding protein 43 N-terminal domain (From Topology) | T: TAR DNA-binding protein 43 N-terminal domain | F: PF18694 | ECOD (1.6) |
E [auth I] | PF18694 | e6t4bI1 | A: a+b two layers | X: beta-Grasp | H: TAR DNA-binding protein 43 N-terminal domain (From Topology) | T: TAR DNA-binding protein 43 N-terminal domain | F: PF18694 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B [auth C], C [auth E], D [auth G], E [auth I] | PF18694 | TAR DNA-binding protein 43, N-terminal domain (TDP43_N) | TAR DNA-binding protein 43, N-terminal domain | This is the N-terminal domain of transactive response DNA-binding protein 43 kDa (TDP-43), an RNA transporting and processing protein whose aberrant aggregates are implicated in neurodegenerative diseases. TDP-43 N-terminal domain has been shown to p ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR000504 | RNA recognition motif domain | Domain |
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR049124 | TAR DNA-binding protein 43, C-terminal | Domain |
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR041105 | TAR DNA-binding protein 43, N-terminal | Domain |
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR012677 | Nucleotide-binding alpha-beta plait domain superfamily | Homologous Superfamily |
A, B [auth C], C [auth E], D [auth G], E [auth I] | IPR035979 | RNA-binding domain superfamily | Homologous Superfamily |