6S6Y

X-ray crystal structure of the formyltransferase/hydrolase complex (FhcABCD) from Methylorubrum extorquens in complex with methylofuran

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d6s6yh1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	automated matches	automated matches	(Methylorubrum extorquens PA1 ) [TaxId: 419610 ],	SCOPe (2.08)
L	d6s6yl1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	automated matches	automated matches	(Methylorubrum extorquens PA1 ) [TaxId: 419610 ],	SCOPe (2.08)
D	d6s6yd1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	automated matches	automated matches	(Methylorubrum extorquens PA1 ) [TaxId: 419610 ],	SCOPe (2.08)
P	d6s6yp1	Alpha and beta proteins (a+b)	Ferredoxin-like	Formylmethanofuran:tetrahydromethanopterin formyltransferase	automated matches	automated matches	(Methylorubrum extorquens PA1 ) [TaxId: 419610 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	F_UNCLASSIFIED	e6s6yA1	A: beta sandwiches	X: Composite domain of metallo-dependent hydrolases (From Topology)	H: Composite domain of metallo-dependent hydrolases (From Topology)	T: Composite domain of metallo-dependent hydrolases	F: F_UNCLASSIFIED	ECOD (1.6)
A	PF07969	e6s6yA2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF07969	ECOD (1.6)
I	F_UNCLASSIFIED	e6s6yI2	A: beta sandwiches	X: Composite domain of metallo-dependent hydrolases (From Topology)	H: Composite domain of metallo-dependent hydrolases (From Topology)	T: Composite domain of metallo-dependent hydrolases	F: F_UNCLASSIFIED	ECOD (1.6)
I	PF07969	e6s6yI1	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF07969	ECOD (1.6)
E	F_UNCLASSIFIED	e6s6yE1	A: beta sandwiches	X: Composite domain of metallo-dependent hydrolases (From Topology)	H: Composite domain of metallo-dependent hydrolases (From Topology)	T: Composite domain of metallo-dependent hydrolases	F: F_UNCLASSIFIED	ECOD (1.6)
E	PF07969	e6s6yE2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF07969	ECOD (1.6)
M	F_UNCLASSIFIED	e6s6yM1	A: beta sandwiches	X: Composite domain of metallo-dependent hydrolases (From Topology)	H: Composite domain of metallo-dependent hydrolases (From Topology)	T: Composite domain of metallo-dependent hydrolases	F: F_UNCLASSIFIED	ECOD (1.6)
M	PF07969	e6s6yM2	A: a/b barrels	X: TIM beta/alpha-barrel	H: TIM barrels (From Topology)	T: TIM barrels	F: PF07969	ECOD (1.6)
B	F_UNCLASSIFIED	e6s6yB2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)	T: Formate dehydrogenase/DMSO reductase, domains 2 and 3	F: F_UNCLASSIFIED	ECOD (1.6)
F	F_UNCLASSIFIED	e6s6yF2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)	T: Formate dehydrogenase/DMSO reductase, domains 2 and 3	F: F_UNCLASSIFIED	ECOD (1.6)
J	F_UNCLASSIFIED	e6s6yJ2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)	T: Formate dehydrogenase/DMSO reductase, domains 2 and 3	F: F_UNCLASSIFIED	ECOD (1.6)
N	F_UNCLASSIFIED	e6s6yN2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Formate dehydrogenase/DMSO reductase, domains 2 and 3 (From Topology)	T: Formate dehydrogenase/DMSO reductase, domains 2 and 3	F: F_UNCLASSIFIED	ECOD (1.6)
H	PF01913	e6s6yH2	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF01913	ECOD (1.6)
H	PF02741	e6s6yH1	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF02741	ECOD (1.6)
L	PF01913	e6s6yL1	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF01913	ECOD (1.6)
L	PF02741	e6s6yL2	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF02741	ECOD (1.6)
D	PF01913	e6s6yD2	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF01913	ECOD (1.6)
D	PF02741	e6s6yD1	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF02741	ECOD (1.6)
P	PF01913	e6s6yP2	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF01913	ECOD (1.6)
P	PF02741	e6s6yP1	A: a+b two layers	X: Alpha-beta plaits	H: Formylmethanofuran:tetrahydromethanopterin formyltransferase (From Topology)	T: Formylmethanofuran:tetrahydromethanopterin formyltransferase	F: PF02741	ECOD (1.6)
O	PF01493	e6s6yO1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Alpha subunit of glutamate synthase-C (From Topology)	T: Alpha subunit of glutamate synthase-C	F: PF01493	ECOD (1.6)
C	PF01493	e6s6yC1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Alpha subunit of glutamate synthase-C (From Topology)	T: Alpha subunit of glutamate synthase-C	F: PF01493	ECOD (1.6)
G	PF01493	e6s6yG1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Alpha subunit of glutamate synthase-C (From Topology)	T: Alpha subunit of glutamate synthase-C	F: PF01493	ECOD (1.6)
K	PF01493	e6s6yK1	A: beta duplicates or obligate multimers	X: Single-stranded right-handed beta-helix	H: Alpha subunit of glutamate synthase-C (From Topology)	T: Alpha subunit of glutamate synthase-C	F: PF01493	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Provenance Source (Version)
H	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	CATH (utative)
L	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	CATH (utative)
D	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	CATH (utative)
P	3.30.70.520	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, E, I, M	PF07969	Amidohydrolase family (Amidohydro_3)	Amidohydrolase family	-	Domain
D, H, L, P	PF01913	Formylmethanofuran-tetrahydromethanopterin formyltransferase (FTR)	Formylmethanofuran-tetrahydromethanopterin formyltransferase	This enzyme EC:2.3.1.101 is involved in archaebacteria in the formation of methane from carbon dioxide. N-terminal distal lobe of alpha+beta ferredoxin-like fold. SCOP reports fold duplication with C-terminal proximal lobe.	Domain
D, H, L, P	PF02741	FTR, proximal lobe (FTR_C)	FTR, proximal lobe	The FTR (Formylmethanofuran--tetrahydromethanopterin formyltransferase) enzyme EC:2.3.1.101 is involved in archaebacteria in the formation of methane from carbon dioxide. C-terminal proximal lobe of alpha+beta ferredoxin-like fold. SCOP reports fold ...	The FTR (Formylmethanofuran--tetrahydromethanopterin formyltransferase) enzyme EC:2.3.1.101 is involved in archaebacteria in the formation of methane from carbon dioxide. C-terminal proximal lobe of alpha+beta ferredoxin-like fold. SCOP reports fold duplication with N-terminal distal lobe.	Domain
C, G, K, O	PF01493	GXGXG motif (GXGXG)	GXGXG motif	-	Family

RCSB PDB Core Operations are funded by the National Science Foundation (DBI-1832184), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.

Prepare Data

Validate Data

Deposit Data

Help and Resources

6S6Y

X-ray crystal structure of the formyltransferase/hydrolase complex (FhcABCD) from Methylorubrum extorquens in complex with methylofuran

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Protein Family Annotation Pfam Database Homepage