Lysine decarboxylase A from Pseudomonas aeruginosa
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Peptidase_M13,Peptidase_M13_N | e6q6iA1 | A: a/b three-layered sandwiches | X: P-loop domains-like | H: Hemagglutinin HA2 chain | T: Hemagglutinin HA2 chain | F: Peptidase_M13,Peptidase_M13_N | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.40.640.10 | Alpha Beta | 3-Layer(aba) Sandwich | Aspartate Aminotransferase | domain 2 | CATH (utative) |
| A | 3.90.1150.10 | Alpha Beta | Alpha-Beta Complex | Aspartate Aminotransferase, domain 1 | Aspartate Aminotransferase, domain 1 | CATH (utative) |
| A | 3.90.100.10 | Alpha Beta | Alpha-Beta Complex | Ornithine Decarboxylase | Chain A, domain 4 | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF03709 | Orn/Lys/Arg decarboxylase, N-terminal domain (OKR_DC_1_N) | Orn/Lys/Arg decarboxylase, N-terminal domain | This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure. | Domain | |
| PF01276 | Orn/Lys/Arg decarboxylase, major domain (OKR_DC_1) | Orn/Lys/Arg decarboxylase, major domain | Domain | ||
| PF03711 | Orn/Lys/Arg decarboxylase, C-terminal domain (OKR_DC_1_C) | Orn/Lys/Arg decarboxylase, C-terminal domain | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Biodegradative arginine decarboxylase |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR005308 | Orn/Lys/Arg decarboxylase, N-terminal | Domain | |
| IPR036633 | Orn/Lys/Arg decarboxylase, C-terminal domain superfamily | Homologous Superfamily | |
| IPR015424 | Pyridoxal phosphate-dependent transferase | Homologous Superfamily | |
| IPR015421 | Pyridoxal phosphate-dependent transferase, major domain | Homologous Superfamily | |
| IPR015422 | Pyridoxal phosphate-dependent transferase, small domain | Homologous Superfamily | |
| IPR000310 | Orn/Lys/Arg decarboxylase, major domain | Domain | |
| IPR011193 | Ornithine/lysine/arginine decarboxylase | Family | |
| IPR008286 | Orn/Lys/Arg decarboxylase, C-terminal | Domain |














