6PBS
Structure of ClpC1-NTD in complex with Ecumicin
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth I] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
D [auth W] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
E [auth Y] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
F [auth e] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
G [auth B] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
I [auth K] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
J [auth M] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
H [auth G] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
K [auth O] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
L [auth T] | SCOP2B Superfamily | Double Clp-N motif | 8075782 | 3001383 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth I] | Clp_N | e6pbsI1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
C | Clp_N | e6pbsC1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
D [auth W] | Clp_N | e6pbsW1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
E [auth Y] | Clp_N | e6pbsY1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
F [auth e] | Clp_N | e6pbse1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
G [auth B] | Clp_N | e6pbsB1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
I [auth K] | Clp_N | e6pbsK1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
J [auth M] | Clp_N | e6pbsM1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
A | Clp_N | e6pbsA1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
H [auth G] | Clp_N | e6pbsG1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
K [auth O] | Clp_N | e6pbsO1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
L [auth T] | Clp_N | e6pbsT1 | A: alpha arrays | X: Histone-like | H: Histone-related | T: double Clp-N | F: Clp_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02861 | Clp amino terminal domain, pathogenicity island component (Clp_N) | Clp amino terminal domain, pathogenicity island component | - | Family | |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR001270 | ClpA/B family | Family | |
IPR018368 | ClpA/B, conserved site 1 | Conserved Site | |
IPR041546 | ClpA/ClpB, AAA lid domain | Domain | |
IPR050130 | ATP-dependent Clp protease/Chaperone ClpA/ClpB | Family | |
IPR004176 | Clp, repeat (R) domain | Domain | |
IPR003593 | AAA+ ATPase domain | Domain | |
IPR003959 | ATPase, AAA-type, core | Domain | |
IPR001943 | UVR domain | Domain | |
IPR019489 | Clp ATPase, C-terminal | Domain | |
IPR036628 | Clp, N-terminal domain superfamily | Homologous Superfamily | |
IPR027417 | P-loop containing nucleoside triphosphate hydrolase | Homologous Superfamily |
Protein Modification Annotation
Modified Residue(s) | ||
---|---|---|
Chain | Residue(s) | Description |
H14 | Parent Component: PHE | |
MLE | Parent Component: LEU :  AA0337 :  N-methyl-L-leucine MOD:00342 | |
MVA | Parent Component: VAL :  AA0337 | |
NZC | Parent Component: THR :  AA0337 | |
O7D | Parent Component: TRP :  AA0337 | |
O7G | Parent Component: VAL :  AA0337 | |
WZJ | AA0337 | :