Annotations: 6OZH

Crystal structure of Ciona intestinalis (Ci) Endonuclease V in complex with a 24mer DNA containing an inosine followed by a ribo-adenosine

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
B	V-set	e6ozhB1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: V-set	ECOD (v295.2)
D	V-set	e6ozhD1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: V-set	ECOD (v295.2)
C	V-set	e6ozhC1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: V-set	ECOD (v295.2)
A	V-set	e6ozhA1	A: alpha arrays	X: Nat/Ivy	H: Acyl-CoA N-acyltransferases (Nat)	T: Acyl-CoA N-acyltransferases (Nat)	F: V-set	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B	3.30.2170.10	Alpha Beta	2-Layer Sandwich	archaeoglobus fulgidus dsm 4304 fold	archaeoglobus fulgidus dsm 4304 superfamily	CATH (utative)
D	3.30.2170.10	Alpha Beta	2-Layer Sandwich	archaeoglobus fulgidus dsm 4304 fold	archaeoglobus fulgidus dsm 4304 superfamily	CATH (utative)
C	3.30.2170.10	Alpha Beta	2-Layer Sandwich	archaeoglobus fulgidus dsm 4304 fold	archaeoglobus fulgidus dsm 4304 superfamily	CATH (utative)
A	3.30.2170.10	Alpha Beta	2-Layer Sandwich	archaeoglobus fulgidus dsm 4304 fold	archaeoglobus fulgidus dsm 4304 superfamily	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF04493	Endonuclease V (Endonuclease_5)	Endonuclease V	Endonuclease V is specific for single-stranded DNA or for duplex DNA that contains uracil or that is damaged by a variety of agents [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, F, G, H	DNA/RNA (5'-D(PCPGPGPTPAPAPCPCPGPI)-R(PA)-D(PTPAPTPGPCPAPGPCPAPTPTPTPC)-3')	-	-	-
A, B, C, D	endonuclease V isoform X2	endonuclease activity nuclease activity catalytic activity, acting on a nucleic acid catalytic activity	-	cellular anatomical structure intracellular anatomical structure cytoplasm

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR007581	Endonuclease V	Family

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.