6NKQ
The structure of bovine beta-lactoglobulin in novel crystals grown at pH 3.8
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | d6nkqb_ | All beta proteins | Lipocalins | Lipocalins | Retinol binding protein-like | automated matches | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
B [auth C] | d6nkqc_ | All beta proteins | Lipocalins | Lipocalins | Retinol binding protein-like | automated matches | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
C [auth D] | d6nkqd_ | All beta proteins | Lipocalins | Lipocalins | Retinol binding protein-like | automated matches | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
D [auth E] | d6nkqe_ | All beta proteins | Lipocalins | Lipocalins | Retinol binding protein-like | automated matches | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
E [auth F] | d6nkqf_ | All beta proteins | Lipocalins | Lipocalins | Retinol binding protein-like | automated matches | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
F [auth A] | d6nkqa_ | All beta proteins | Lipocalins | Lipocalins | Retinol binding protein-like | automated matches | (Bos taurus ) [TaxId: 9913 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth B] | SCOP2B Superfamily | Lipocalins | 8042609 | 3001332 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | Lipocalins | 8042609 | 3001332 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Lipocalins | 8042609 | 3001332 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Lipocalins | 8042609 | 3001332 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Lipocalins | 8042609 | 3001332 | SCOP2B (2022-06-29) |
F [auth A] | SCOP2B Superfamily | Lipocalins | 8042609 | 3001332 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | PF00061 | e6nkqB1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: PF00061 | ECOD (1.6) |
B [auth C] | PF00061 | e6nkqC1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: PF00061 | ECOD (1.6) |
C [auth D] | PF00061 | e6nkqD1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: PF00061 | ECOD (1.6) |
D [auth E] | PF00061 | e6nkqE1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: PF00061 | ECOD (1.6) |
E [auth F] | PF00061 | e6nkqF1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: PF00061 | ECOD (1.6) |
F [auth A] | PF00061 | e6nkqA1 | A: beta barrels | X: Lipocalins/Streptavidin | H: Lipocalins (From Topology) | T: Lipocalins | F: PF00061 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A [auth B] | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (4.3.0) |
B [auth C] | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (4.3.0) |
C [auth D] | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (4.3.0) |
D [auth E] | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (4.3.0) |
E [auth F] | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (4.3.0) |
F [auth A] | 2.40.128.20 | Mainly Beta | Beta Barrel | Lipocalin | Calycin beta-barrel core domain | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00061 | Lipocalin / cytosolic fatty-acid binding protein family (Lipocalin) | Lipocalin / cytosolic fatty-acid binding protein family | Lipocalins are transporters for small hydrophobic molecules, such as lipids, steroid hormones, bilins, and retinoids. The family also encompasses the enzyme prostaglandin D synthase (EC:5.3.99.2). Alignment subsumes both the lipocalin and fatty acid ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002447 | Beta-lactoglobulin | Family | |
IPR012674 | Calycin | Homologous Superfamily | |
IPR002345 | Lipocalin | Family | |
IPR000566 | Lipocalin/cytosolic fatty-acid binding domain | Domain | |
IPR022272 | Lipocalin family conserved site | Conserved Site |