Annotations: 6LZ1

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	3.20.110.10	Alpha Beta	Alpha-Beta Barrel	7-stranded beta/alpha barrel	Glycoside hydrolase 38, N terminal domain	CATH (utative)
D	2.70.98.30	Mainly Beta	Distorted Sandwich	Beta-galactosidase	Chain A, domain 5	CATH (utative)
C	3.20.110.10	Alpha Beta	Alpha-Beta Barrel	7-stranded beta/alpha barrel	Glycoside hydrolase 38, N terminal domain	CATH (utative)
C	2.70.98.30	Mainly Beta	Distorted Sandwich	Beta-galactosidase	Chain A, domain 5	CATH (utative)
B	3.20.110.10	Alpha Beta	Alpha-Beta Barrel	7-stranded beta/alpha barrel	Glycoside hydrolase 38, N terminal domain	CATH (utative)
B	2.70.98.30	Mainly Beta	Distorted Sandwich	Beta-galactosidase	Chain A, domain 5	CATH (utative)
A	3.20.110.10	Alpha Beta	Alpha-Beta Barrel	7-stranded beta/alpha barrel	Glycoside hydrolase 38, N terminal domain	CATH (utative)
A	2.70.98.30	Mainly Beta	Distorted Sandwich	Beta-galactosidase	Chain A, domain 5	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF22907	Alpha-mannosidase, jelly roll domain (Ams1-like_1st)	Alpha-mannosidase, jelly roll domain	This domain is found at the N-terminal end of Alpha-mannosidase 2C1 from Schizosaccharomyces pombe (Ams1) and similar sequences mainly from eukaryota and some species from actinomycetes. Ams1 hydrolyse terminal alpha-linked mannoses in free oligosacc ...	This domain is found at the N-terminal end of Alpha-mannosidase 2C1 from Schizosaccharomyces pombe (Ams1) and similar sequences mainly from eukaryota and some species from actinomycetes. Ams1 hydrolyse terminal alpha-linked mannoses in free oligosaccharides released from misfolded glycoproteins or lipid-linked oligosaccharide donors. This entry represents the jelly-roll domain [2].	Domain
A, B, C, D	PF01074	Glycosyl hydrolases family 38 N-terminal domain (Glyco_hydro_38N)	Glycosyl hydrolases family 38 N-terminal domain	Glycosyl hydrolases are key enzymes of carbohydrate metabolism.	Domain
A, B, C, D	PF17677	Glycosyl hydrolases family 38 C-terminal beta sandwich domain (Glyco_hydro38C2)	Glycosyl hydrolases family 38 C-terminal beta sandwich domain	This domain is found at the C-terminal end of various glycosyl hydrolases belonging to family 38. The domain has a beta sandwich fold.	Domain
A, B, C, D	PF09261	Alpha mannosidase middle domain (Alpha-mann_mid)	Alpha mannosidase middle domain	Members of this family adopt a structure consisting of three alpha helices, in an immunoglobulin/albumin-binding domain-like fold. They are predominantly found in the enzyme alpha-mannosidase [1].	Domain
A, B, C, D	PF07748	Glycosyl hydrolases family 38 C-terminal domain (Glyco_hydro_38C)	Glycosyl hydrolases family 38 C-terminal domain	Glycosyl hydrolases are key enzymes of carbohydrate metabolism.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D	Ams1	binding carbohydrate binding mannosyl-oligosaccharide 1,3-alpha-mannosidase activity mannosyl-oligosaccharide mannosidase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds mannosidase activity hydrolase activity alpha-mannosidase activity catalytic activity mannosyl-oligosaccharide 1,6-alpha-mannosidase activity cation binding ion binding metal ion binding binding carbohydrate binding mannosyl-oligosaccharide 1,3-alpha-mannosidase activity mannosyl-oligosaccharide mannosidase activity hydrolase activity, acting on glycosyl bonds hydrolase activity, hydrolyzing O-glycosyl compounds mannosidase activity hydrolase activity alpha-mannosidase activity catalytic activity mannosyl-oligosaccharide 1,6-alpha-mannosidase activity cation binding ion binding metal ion binding small molecule binding	monosaccharide metabolic process carbohydrate metabolic process mannose metabolic process hexose metabolic process small molecule metabolic process metabolic process cellular process primary metabolic process catabolic process oligosaccharide catabolic process oligosaccharide metabolic process carbohydrate catabolic process	vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle vacuolar membrane membrane-bounded organelle storage vacuole intracellular anatomical structure membrane lytic vacuole vacuole intracellular membrane-bounded organelle fungal-type vacuole intracellular organelle lytic vacuole membrane bounding membrane of organelle cellular anatomical structure organelle cytoplasm organelle membrane fungal-type vacuole membrane cytosol membrane-enclosed lumen vacuolar lumen intracellular organelle lumen organelle lumen fungal-type vacuole lumen

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR028995	Glycoside hydrolase families 57/38, central domain superfamily	Homologous Superfamily
A, B, C, D	IPR015341	Glycoside hydrolase family 38, central domain	Domain
A, B, C, D	IPR011330	Glycoside hydrolase/deacetylase, beta/alpha-barrel	Homologous Superfamily
A, B, C, D	IPR054723	Alpha-mannosidase Ams1-like, N-terminal	Domain
A, B, C, D	IPR011682	Glycosyl hydrolase family 38, C-terminal	Domain
A, B, C, D	IPR041147	Glycosyl hydrolases family 38, C-terminal domain	Domain
A, B, C, D	IPR000602	Glycoside hydrolase family 38, N-terminal domain	Domain
A, B, C, D	IPR027291	Glycoside hydrolase 38, N-terminal domain superfamily	Homologous Superfamily
A, B, C, D	IPR011013	Galactose mutarotase-like domain superfamily	Homologous Superfamily
A, B, C, D	IPR037094	Glycoside hydrolase family 38, central domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.