6LKQ | pdb_00006lkq

The Structural Basis for Inhibition of Ribosomal Translocation by Viomycin

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
I	SCOP2 Family	Ribosomal protein S10	8095176	4001240	SCOP2 (2022-06-29)
I	SCOP2 Superfamily	Ribosomal protein S10	8095177	3001336	SCOP2 (2022-06-29)
H	SCOP2 Family	Translational machinery components	8095228	4000951	SCOP2 (2022-06-29)
H	SCOP2 Superfamily	Ribosomal protein S5 domain 2-like	8095229	3000100	SCOP2 (2022-06-29)
G	SCOP2 Family	Ribosomal protein S8	8095406	4002027	SCOP2 (2022-06-29)
G	SCOP2 Superfamily	Ribosomal protein S8	8095407	3000709	SCOP2 (2022-06-29)
F	SCOP2 Family	Ribosomal protein S7	8095102	4001112	SCOP2 (2022-06-29)
F	SCOP2 Superfamily	Ribosomal protein S7	8095103	3000799	SCOP2 (2022-06-29)
E	SCOP2 Family	Ribosomal protein S6	8102804	4001337	SCOP2 (2022-06-29)
E	SCOP2 Superfamily	Ribosomal protein S6	8102805	3001323	SCOP2 (2022-06-29)
WA [auth n]	SCOP2 Family	Ribosomal protein L10-like	8096579	4001998	SCOP2 (2022-06-29)
WA [auth n]	SCOP2 Superfamily	Ribosomal protein L10-like	8096580	3000665	SCOP2 (2022-06-29)
VA [auth m]	SCOP2 Family	Ribosomal protein L36	8093553	4003715	SCOP2 (2022-06-29)
VA [auth m]	SCOP2 Superfamily	Ribosomal protein L36	8093554	3001346	SCOP2 (2022-06-29)
UA [auth l]	SCOP2 Family	Ribosomal protein L35p	8093583	4003406	SCOP2 (2022-06-29)
UA [auth l]	SCOP2 Superfamily	L35p-like	8093584	3000790	SCOP2 (2022-06-29)
RA [auth i]	SCOP2 Family	Ribosomal protein L32p	8093521	4000508	SCOP2 (2022-06-29)
RA [auth i]	SCOP2 Superfamily	Zn-binding ribosomal proteins	8093522	3001320	SCOP2 (2022-06-29)
PA [auth g]	SCOP2 Family	Ribosomal protein L29 (L29p)	8097945	4000600	SCOP2 (2022-06-29)
PA [auth g]	SCOP2 Superfamily	Ribosomal protein L29 (L29p)	8097946	3000713	SCOP2 (2022-06-29)
OA [auth f]	SCOP2 Family	Ribosomal protein L28	8093475	4003961	SCOP2 (2022-06-29)
OA [auth f]	SCOP2 Superfamily	L28p-like	8093476	3001966	SCOP2 (2022-06-29)
MA [auth d]	SCOP2 Family	Ribosomal protein L25-like	8093525	4002376	SCOP2 (2022-06-29)
MA [auth d]	SCOP2 Superfamily	Ribosomal protein L25-like	8093526	3001161	SCOP2 (2022-06-29)
LA [auth c]	SCOP2 Family	Ribosomal proteins L24p and L21e	8097765	4001752	SCOP2 (2022-06-29)
LA [auth c]	SCOP2 Superfamily	Translation proteins SH3-like KOW motif containing domain	8097766	3000334	SCOP2 (2022-06-29)
KA [auth b]	SCOP2 Family	L23p	8093681	4000943	SCOP2 (2022-06-29)
KA [auth b]	SCOP2 Superfamily	Ribosomal proteins S24e, L23 and L15e	8093682	3000210	SCOP2 (2022-06-29)
JA [auth a]	SCOP2 Family	Ribosomal protein L22	8097767	4001212	SCOP2 (2022-06-29)
JA [auth a]	SCOP2 Superfamily	Ribosomal protein L22	8097768	3001078	SCOP2 (2022-06-29)
IA [auth 9]	SCOP2 Family	Ribosomal protein l21p	8093587	4001630	SCOP2 (2022-06-29)
IA [auth 9]	SCOP2 Superfamily	l21p-like	8093588	3002005	SCOP2 (2022-06-29)
FA [auth 5]	SCOP2 Family	Ribosomal protein L18p and S11	8097877	4000555	SCOP2 (2022-06-29)
FA [auth 5]	SCOP2 Superfamily	Translational machinery components	8097878	3000571	SCOP2 (2022-06-29)
DA [auth 3]	SCOP2 Family	Ribosomal protein L16p	8097881	4003717	SCOP2 (2022-06-29)
DA [auth 3]	SCOP2 Superfamily	Ribosomal protein L16p/L10e	8097882	3000884	SCOP2 (2022-06-29)
C	SCOP2 Family	Ribosomal protein S4	8096837	4001399	SCOP2 (2022-06-29)
C	SCOP2 Superfamily	Alpha-L RNA-binding motif	8096838	3001473	SCOP2 (2022-06-29)
CA [auth 2]	SCOP2B Superfamily	Ribosomal proteins L15p and L18e	8096018	3001045	SCOP2B (2022-06-29)
BA [auth 1]	SCOP2 Family	Ribosomal protein L14	8100867	4001826	SCOP2 (2022-06-29)
BA [auth 1]	SCOP2 Superfamily	50S Ribosomal protein L14-like	8100868	3000433	SCOP2 (2022-06-29)
AA [auth 0]	SCOP2 Family	Ribosomal protein L13	8100807	4003623	SCOP2 (2022-06-29)
AA [auth 0]	SCOP2 Superfamily	Ribosomal protein L13	8100808	3001134	SCOP2 (2022-06-29)
X	SCOP2 Family	Ribosomal protein L5	8097875	4001498	SCOP2 (2022-06-29)
X	SCOP2 Superfamily	RL5-like	8097876	3001709	SCOP2 (2022-06-29)
W	SCOP2 Family	Ribosomal protein L4	8098029	4003628	SCOP2 (2022-06-29)
W	SCOP2 Superfamily	Ribosomal protein L4	8098030	3001146	SCOP2 (2022-06-29)
V	SCOP2 Family	Ribosomal protein L3	8093569	4002103	SCOP2 (2022-06-29)
V	SCOP2 Superfamily	Translational proteins	8093570	3000811	SCOP2 (2022-06-29)
T	SCOP2 Family	Ribosomal protein S21	8093477	4006173	SCOP2 (2022-06-29)
T	SCOP2 Superfamily	Ribosomal protein S21	8093478	3002159	SCOP2 (2022-06-29)
R	SCOP2 Family	Ribosomal protein S19	8094057	4001081	SCOP2 (2022-06-29)
R	SCOP2 Superfamily	Ribosomal protein S19	8094058	3000686	SCOP2 (2022-06-29)
P	SCOP2 Family	Cold shock DNA-binding domain-like	8095074	4001909	SCOP2 (2022-06-29)
P	SCOP2 Superfamily	Nucleic acid-binding proteins	8095075	3000135	SCOP2 (2022-06-29)
O	SCOP2 Family	Ribosomal protein S16	8096013	4001077	SCOP2 (2022-06-29)
O	SCOP2 Superfamily	Ribosomal protein S16	8096014	3000680	SCOP2 (2022-06-29)
N	SCOP2 Family	30S Ribosomal protein S15 / 40S Ribosomal protein S13	8093417	4000767	SCOP2 (2022-06-29)
N	SCOP2 Superfamily	S15/NS1 RNA-binding domain	8093418	3001284	SCOP2 (2022-06-29)
M	SCOP2B Superfamily	Glucocorticoid receptor-like (DNA-binding domain)	8093698	3000068	SCOP2B (2022-06-29)
K	SCOP2 Family	Cold shock DNA-binding domain-like	8094644	4001909	SCOP2 (2022-06-29)
K	SCOP2 Superfamily	Nucleic acid-binding proteins	8094645	3000135	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	SIS domain/Ribosomal protein S2-like	8097404	3001397	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I	USP7_ICP0_bdg	e6lkqI1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
H	USP7_ICP0_bdg	e6lkqH1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
G	USP7_ICP0_bdg	e6lkqG1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
F	USP7_ICP0_bdg	e6lkqF1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
EB [auth v]	KWL1	e6lkqv1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)
ZA [auth q]	KWL1	e6lkqq1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)
YA [auth p]	KWL1	e6lkqp1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)
XA [auth o]	USP7_ICP0_bdg	e6lkqo1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
AB [auth r]	KWL1	e6lkqr1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)
E	USP7_ICP0_bdg	e6lkqE1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
WA [auth n]	USP7_ICP0_bdg	e6lkqn1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
VA [auth m]	USP7_ICP0_bdg	e6lkqm1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
UA [auth l]	USP7_ICP0_bdg	e6lkql1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
TA [auth k]	USP7_ICP0_bdg	e6lkqk1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
SA [auth j]	USP7_ICP0_bdg	e6lkqj1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
RA [auth i]	USP7_ICP0_bdg	e6lkqi1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
QA [auth h]	USP7_ICP0_bdg	e6lkqh1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
PA [auth g]	USP7_ICP0_bdg	e6lkqg1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
OA [auth f]	USP7_ICP0_bdg	e6lkqf1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
NA [auth e]	USP7_ICP0_bdg	e6lkqe1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
D	USP7_ICP0_bdg	e6lkqD1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
MA [auth d]	USP7_ICP0_bdg	e6lkqd1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
LA [auth c]	KWL1	e6lkqc1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)
KA [auth b]	USP7_ICP0_bdg	e6lkqb1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
JA [auth a]	USP7_ICP0_bdg	e6lkqa1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
IA [auth 9]	USP7_ICP0_bdg	e6lkq91	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
HA [auth 8]	USP7_ICP0_bdg	e6lkq81	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
GA [auth 6]	USP7_ICP0_bdg	e6lkq61	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
FA [auth 5]	USP7_ICP0_bdg	e6lkq51	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
EA [auth 4]	USP7_ICP0_bdg	e6lkq41	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
DA [auth 3]	KWL1	e6lkq31	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)
C	USP7_ICP0_bdg	e6lkqC1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
CA [auth 2]	USP7_ICP0_bdg	e6lkq21	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
BA [auth 1]	USP7_ICP0_bdg	e6lkq11	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
AA [auth 0]	USP7_ICP0_bdg	e6lkq01	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
Z	USP7_ICP0_bdg	e6lkqZ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
Y	USP7_ICP0_bdg	e6lkqY1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
X	USP7_ICP0_bdg	e6lkqX1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
W	USP7_ICP0_bdg	e6lkqW1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
V	USP7_ICP0_bdg	e6lkqV1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
U	USP7_ICP0_bdg	e6lkqU1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
T	USP7_ICP0_bdg	e6lkqT1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
B	KWL1	e6lkqB1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)
S	USP7_ICP0_bdg	e6lkqS1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
R	USP7_ICP0_bdg	e6lkqR1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
Q	USP7_ICP0_bdg	e6lkqQ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
P	USP7_ICP0_bdg	e6lkqP1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
O	USP7_ICP0_bdg	e6lkqO1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
N	USP7_ICP0_bdg	e6lkqN1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
M	USP7_ICP0_bdg	e6lkqM1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
L	USP7_ICP0_bdg	e6lkqL1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
K	USP7_ICP0_bdg	e6lkqK1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
J	USP7_ICP0_bdg	e6lkqJ1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	T: Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	F: USP7_ICP0_bdg	ECOD (v294.1)
A	KWL1	e6lkqA1	A: a/b three-layered sandwiches	X: Immunoglobulin-like beta-sandwich	H: Immunoglobulin-related	T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like	F: KWL1	ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I	30S ribosomal protein S10	-	-	-
H	30S ribosomal protein S9	-	-	-
G	30S ribosomal protein S8	-	-	-
F	30S ribosomal protein S7	-	-	-
GB [auth y], HB [auth z], IB [auth 7], JB [auth AA], KB [auth BA]	Viomycin	-	-	-
FB [auth w]	messenger RNA	-	-	-
EB [auth v]	Peptide chain release factor 3	guanosine tetraphosphate binding guanyl nucleotide binding binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding guanosine tetraphosphate binding guanyl nucleotide binding binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding translation release factor activity, codon specific translation factor activity translation release factor activity translation termination factor activity translation release factor activity, codon nonspecific GTP binding purine ribonucleoside triphosphate binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	regulation of cellular process regulation of cellular component organization protein-containing complex disassembly protein biosynthetic process regulation of protein-containing complex disassembly regulation of primary metabolic process cellular component organization post-transcriptional regulation of gene expression protein metabolic process translational termination cellular component organization or biogenesis regulation of biosynthetic process cellular component disassembly regulation of biological process regulation of cellular process regulation of cellular component organization protein-containing complex disassembly protein biosynthetic process regulation of protein-containing complex disassembly regulation of primary metabolic process cellular component organization post-transcriptional regulation of gene expression protein metabolic process translational termination cellular component organization or biogenesis regulation of biosynthetic process cellular component disassembly regulation of biological process protein-containing complex organization regulation of protein metabolic process regulation of translational termination biological regulation primary metabolic process regulation of macromolecule metabolic process gene expression translation macromolecule biosynthetic process regulation of gene expression biosynthetic process regulation of translation regulation of macromolecule biosynthetic process metabolic process cellular process macromolecule metabolic process regulation of metabolic process	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol
DB [auth u]	5S ribosomal RNA	-	-	-
CB [auth t]	23S ribosomal RNA	-	-	-
BB [auth s]	16S ribosomal RNA	-	-	-
AB [auth r], XA [auth o], YA [auth p], ZA [auth q]	50S ribosomal protein L7/L12	RNA binding binding nucleic acid binding mRNA binding structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
E	30S ribosomal protein S6	-	-	-
WA [auth n]	50S ribosomal protein L10	-	-	-
VA [auth m]	50S ribosomal protein L36	-	-	-
UA [auth l]	50S ribosomal protein L35	-	-	-
TA [auth k]	50S ribosomal protein L34	-	-	-
SA [auth j]	50S ribosomal protein L33	-	-	-
RA [auth i]	50S ribosomal protein L32	-	-	-
QA [auth h]	50S ribosomal protein L30	-	-	-
PA [auth g]	50S ribosomal protein L29	-	-	-
OA [auth f]	50S ribosomal protein L28	-	-	-
NA [auth e]	50S ribosomal protein L27	-	-	-
D	30S ribosomal protein S5	-	-	-
MA [auth d]	50S ribosomal protein L25	-	-	-
LA [auth c]	50S ribosomal protein L24	-	-	-
KA [auth b]	50S ribosomal protein L23	-	-	-
JA [auth a]	50S ribosomal protein L22	-	-	-
IA [auth 9]	50S ribosomal protein L21	-	-	-
HA [auth 8]	50S ribosomal protein L20	-	-	-
GA [auth 6]	50S ribosomal protein L19	-	-	-
FA [auth 5]	50S ribosomal protein L18	-	-	-
EA [auth 4]	50S ribosomal protein L17	-	-	-
DA [auth 3]	50S ribosomal protein L16	-	-	-
C	30S ribosomal protein S4	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process cellular component biogenesis ribosome biogenesis ribonucleoprotein complex biogenesis cellular process cellular component organization or biogenesis ribosomal small subunit biogenesis biosynthetic process metabolic process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome
CA [auth 2]	50S ribosomal protein L15	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol protein-containing complex intracellular anatomical structure intracellular membraneless organelle intracellular organelle ribosomal subunit cytosolic large ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol large ribosomal subunit
BA [auth 1]	50S ribosomal protein L14	-	-	-
AA [auth 0]	50S ribosomal protein L13	-	-	-
Z	50S ribosomal protein L11	-	-	-
Y	50S ribosomal protein L6	-	-	-
X	50S ribosomal protein L5	-	-	-
W	50S ribosomal protein L4	-	-	-
V	50S ribosomal protein L3	-	-	-
U	50S ribosomal protein L2	-	-	-
T	30S ribosomal protein S21	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex ribonucleoprotein complex intracellular organelle cellular anatomical structure intracellular anatomical structure organelle membraneless organelle intracellular membraneless organelle ribosome
B	30S ribosomal protein S3	-	-	-
S	30S ribosomal protein S20	-	-	-
R	30S ribosomal protein S19	-	-	-
Q	30S ribosomal protein S18	-	-	-
P	30S ribosomal protein S17	-	-	-
O	30S ribosomal protein S16	-	-	-
N	30S ribosomal protein S15	-	-	-
M	30S ribosomal protein S14	structural molecule activity structural constituent of ribosome RNA binding binding rRNA binding nucleic acid binding	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle ribosomal subunit intracellular organelle cellular anatomical structure ribonucleoprotein complex organelle membraneless organelle ribosome cytoplasm
L	30S ribosomal protein S13	-	-	-
K	30S ribosomal protein S12	-	-	-
J	30S ribosomal protein S11	-	-	-
A	30S ribosomal protein S2	structural molecule activity structural constituent of ribosome	biosynthetic process metabolic process cellular process primary metabolic process protein metabolic process macromolecule metabolic process translation gene expression protein biosynthetic process macromolecule biosynthetic process	cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosolic small ribosomal subunit protein-containing complex intracellular anatomical structure small ribosomal subunit intracellular membraneless organelle intracellular organelle ribosomal subunit cellular anatomical structure cytosolic ribosome organelle ribonucleoprotein complex membraneless organelle ribosome cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
EB [auth v]	IPR005225	Small GTP-binding domain	Domain
EB [auth v]	IPR032090	Peptide chain release factor 3, C-terminal	Domain
EB [auth v]	IPR000795	Translational (tr)-type GTP-binding domain	Domain
EB [auth v]	IPR041732	Peptide chain release factor 3, GTP-binding domain	Domain
EB [auth v]	IPR031157	Tr-type G domain, conserved site	Conserved Site
EB [auth v]	IPR035647	EF-G domain III/V-like	Homologous Superfamily
EB [auth v]	IPR053905	Elongation factor G-like, domain II	Domain
EB [auth v]	IPR004548	Peptide chain release factor 3	Family
EB [auth v]	IPR009000	Translation protein, beta-barrel domain superfamily	Homologous Superfamily
EB [auth v]	IPR038467	Peptide chain release factor 3, domain III superfamily	Homologous Superfamily
EB [auth v]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
AB [auth r], XA [auth o], YA [auth p], ZA [auth q]	IPR008932	Large ribosomal subunit protein bL12, oligomerization	Domain
AB [auth r], XA [auth o], YA [auth p], ZA [auth q]	IPR013823	Large ribosomal subunit protein bL12, C-terminal	Domain
AB [auth r], XA [auth o], YA [auth p], ZA [auth q]	IPR036235	Large ribosomal subunit protein bL12, oligomerization domain superfamily	Homologous Superfamily
AB [auth r], XA [auth o], YA [auth p], ZA [auth q]	IPR014719	Ribosomal protein bL12, C-terminal/adaptor protein ClpS-like	Homologous Superfamily
AB [auth r], XA [auth o], YA [auth p], ZA [auth q]	IPR000206	Large ribosomal subunit protein bL12	Family
C	IPR018079	Small ribosomal subunit protein uS4, conserved site	Conserved Site
C	IPR002942	RNA-binding S4 domain	Domain
C	IPR001912	Small ribosomal subunit protein uS4, N-terminal	Domain
C	IPR036986	RNA-binding S4 domain superfamily	Homologous Superfamily
C	IPR022801	Small ribosomal subunit protein uS4	Family
C	IPR005709	Small ribosomal subunit protein uS4, bacteria	Family
CA [auth 2]	IPR021131	Large ribosomal subunit protein uL15/eL18	Domain
CA [auth 2]	IPR030878	Large ribosomal subunit protein uL15	Family
CA [auth 2]	IPR001196	Large ribosomal subunit protein uL15, conserved site	Conserved Site
CA [auth 2]	IPR036227	Large ribosomal subunit protein uL15/eL18 superfamily	Homologous Superfamily
CA [auth 2]	IPR005749	Large ribosomal subunit protein uL15, bacteria	Family
T	IPR038380	Small ribosomal subunit protein bS21 superfamily	Homologous Superfamily
T	IPR018278	Small ribosomal subunit protein bS21, conserved site	Conserved Site
T	IPR001911	Small ribosomal subunit protein bS21	Family
M	IPR001209	Small ribosomal subunit protein uS14	Family
M	IPR018271	Small ribosomal subunit protein uS14, conserved site	Conserved Site
M	IPR023036	Small ribosomal subunit protein uS14, bacteria/plastid	Family
A	IPR005706	Small ribosomal subunit protein uS2, bacteria/mitochondria/plastid	Family
A	IPR023591	Small ribosomal subunit protein uS2, flavodoxin-like domain superfamily	Homologous Superfamily
A	IPR018130	Small ribosomal subunit protein uS2, conserved site	Conserved Site
A	IPR001865	Small ribosomal subunit protein uS2	Family