6L9C | pdb_00006l9c

Neutron structure of copper amine oxidase from Arthrobacter glibiformis at pD 7.4

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Protein Modification Annotation

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
A [auth X]	SCOP2B Superfamily	Amine oxidase N-terminal region	8032893	3000455	SCOP2B (2022-06-29)
A [auth X]	SCOP2B Superfamily	Amine oxidase N-terminal region	8032892	3000455	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth X]	Cu_amine_oxid	e6l9cX3	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: supersandwich (From Topology)	T: supersandwich	F: Cu_amine_oxid	ECOD (1.6)
A [auth X]	Cu_amine_oxidN3	e6l9cX1	A: a+b two layers	X: Cystatin-like	H: Amine oxidase N-terminal region (From Topology)	T: Amine oxidase N-terminal region	F: Cu_amine_oxidN3	ECOD (1.6)
A [auth X]	tynA	e6l9cX2	A: a+b two layers	X: Cystatin-like	H: Amine oxidase N-terminal region (From Topology)	T: Amine oxidase N-terminal region	F: tynA	ECOD (1.6)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth X]	Phenylethylamine oxidase	cation binding transition metal ion binding copper ion binding ion binding binding metal ion binding small molecule binding oxidoreductase activity, acting on the CH-NH2 group of donors oxidoreductase activity oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor primary methylamine oxidase activity catalytic activity quinone binding	amine metabolic process metabolic process cellular process	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth X]	IPR000269	Copper amine oxidase	Family
A [auth X]	IPR036460	Copper amine oxidase, catalytic domain superfamily	Homologous Superfamily
A [auth X]	IPR054157	AGAO-like, N2 domain	Domain
A [auth X]	IPR015798	Copper amine oxidase, catalytic domain	Domain
A [auth X]	IPR049947	Copper amine oxidase, copper-binding site	Conserved Site
A [auth X]	IPR016182	Copper amine oxidase, N-terminal	Homologous Superfamily
A [auth X]	IPR049948	Copper amine oxidase, TPQ-binding site	Conserved Site

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
A [auth X]	ASA	Parent Component: ASP
A [auth X]	E9C	Parent Component: TYR
A [auth X]	TPQ	Parent Component: TYR RESID: AA0147 PSI-MOD : oxidation of tyrosine to L-2',4',5'-topaquinone MOD:00156

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.