Domain Annotation: SCOP/SCOPe Classification SCOP Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Ad6i9ya_ Alpha and beta proteins (a+b) Urease, gamma-subunit Urease, gamma-subunit Urease, gamma-subunit automated matches (Sporosarcina pasteurii ) [TaxId: 1474 ], SCOPe (2.08)
Bd6i9yb_ All beta proteins beta-clip Urease, beta-subunit Urease, beta-subunit Urease, beta-subunit (Sporosarcina pasteurii ) [TaxId: 1474 ], SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2B SuperfamilyUrease gamma-subunit8078157 3001945 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyUrease beta-subunit8043131 3001949 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyComposite domain of metallo-dependent hydrolases8043172 3000176 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMetallo-dependent hydrolases8043430 3000428 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyMetallo-dependent hydrolases8043430 3000428 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyComposite domain of metallo-dependent hydrolases8043172 3000176 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
APF00547e6i9yA1 A: a+b two layersX: Urease, gamma-subunit (From Topology)H: Urease, gamma-subunit (From Topology)T: Urease, gamma-subunitF: PF00547ECOD (1.6)
BPF00699e6i9yB1 A: beta sandwichesX: Immunoglobulin-like beta-sandwichH: Urease, beta-subunit (From Topology)T: Urease, beta-subunitF: PF00699ECOD (1.6)
CPF00449e6i9yC1 A: beta sandwichesX: Composite domain of metallo-dependent hydrolases (From Topology)H: Composite domain of metallo-dependent hydrolases (From Topology)T: Composite domain of metallo-dependent hydrolasesF: PF00449ECOD (1.6)
CPF01979e6i9yC2 A: a/b barrelsX: TIM beta/alpha-barrelH: TIM barrels (From Topology)T: TIM barrelsF: PF01979ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.280.10 Alpha Beta 2-Layer Sandwich Urease subunit ACATH (utative)
B2.10.150.10 Mainly Beta Ribbon Urease, subunit B Urease, beta subunitCATH (utative)
C2.30.40.10 Mainly Beta Roll Urease, subunit C domain 1CATH (utative)
C3.20.20.140 Alpha Beta Alpha-Beta Barrel TIM Barrel Metal-dependent hydrolasesCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00547Urease, gamma subunit (Urease_gamma)Urease, gamma subunitUrease is a nickel-binding enzyme that catalyses the hydrolysis of urea to carbon dioxide and ammonia.Domain
PF00699Urease beta subunit (Urease_beta)Urease beta subunitThis subunit is known as alpha in Heliobacter.Domain
PF00449Urease alpha-subunit, N-terminal domain (Urease_alpha)Urease alpha-subunit, N-terminal domainThe N-terminal domain is a composite domain and plays a major trimer stabilising role by contacting the catalytic domain of the symmetry related alpha-subunit.Domain
PF01979Amidohydrolase family (Amidohydro_1)Amidohydrolase familyThis family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ...This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source [2]. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyse the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit [3]. Dihydroorotases (EC:3.5.2.3) are also included [4-5].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Urease subunit gamma
Urease subunit beta
Urease subunit alpha

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
CXM Parent Component: MET

RESIDAA0363 , AA0493

PSI-MOD :  N-carboxy-L-methionine MOD:00368 , N-(dihydroxymethyl)-L-methionine (fMet) MOD:01446 , N-(dihydroxymethyl)-L-methionine (Met) MOD:01447
KCX Parent Component: LYS

RESIDAA0363 , AA0493