Annotations: 6GVE

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth D]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)
C [auth A]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)
E [auth F]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)
F [auth I]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)
G [auth K]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)
H [auth N]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)
I [auth O]	SCOP2B Superfamily	GAPDH-like	8068893	3000043	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A [auth P]	7tm_1	e6gveP1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: 7tm_1	ECOD (v294.1)
N [auth C]	7tm_1	e6gveC1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: 7tm_1	ECOD (v294.1)
O [auth H]	7tm_1	e6gveH1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: 7tm_1	ECOD (v294.1)
P [auth M]	7tm_1	e6gveM1	A: a/b three-layered sandwiches	X: Rubredoxin-like	H: Rubredoxin-related	T: Rubredoxin-related	F: 7tm_1	ECOD (v294.1)
B [auth D]	Acyl-CoA_dh_N	e6gveD1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: Acyl-CoA_dh_N	ECOD (v294.1)
C [auth A]	TrbI	e6gveA1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
D [auth E]	TrbI	e6gveE1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
E [auth F]	TrbI	e6gveF1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
F [auth I]	TrbI	e6gveI1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
G [auth K]	TrbI	e6gveK1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
H [auth N]	TrbI	e6gveN1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
I [auth O]	TrbI	e6gveO1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
J	Acyl-CoA_dh_N	e6gveJ1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: Acyl-CoA_dh_N	ECOD (v294.1)
K [auth B]	TrbI	e6gveB1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
L [auth G]	TrbI	e6gveG1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)
M [auth L]	TrbI	e6gveL1	A: a/b three-layered sandwiches	X: Ten stranded beta/alpha barrel	H: Ten stranded beta/alpha barrel	T: Ten stranded beta/alpha barrel	F: TrbI	ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
B [auth D]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)
C [auth A]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)
D [auth E]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)
E [auth F]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)
F [auth I]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)
G [auth K]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)
H [auth N]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)
I [auth O]	3.30.360.10	Alpha Beta	2-Layer Sandwich	Dihydrodipicolinate Reductase	domain 2	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth P], N [auth C], O [auth H], P [auth M]	PF02672	CP12 domain (CP12)	CP12 domain	-	Family
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	PF02800	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain (Gp_dh_C)	Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain	GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. C-terminal domain is a mixed alpha/antiparallel beta fold.	Domain
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	PF00044	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain (Gp_dh_N)	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain	GAPDH is a tetrameric NAD-binding enzyme involved in glycolysis and glyconeogenesis. N-terminal domain is a Rossmann NAD(P) binding fold.	Domain
J, K [auth B], L [auth G], M [auth L]	PF00485	Phosphoribulokinase / Uridine kinase family (PRK)	Phosphoribulokinase / Uridine kinase family	This family matches three types of P-loop containing kinases: phosphoribulokinases [1], uridine kinases [2] and bacterial pantothenate kinases(CoaA) [3]. Arabidopsis and other organisms have a dual uridine kinase/uracil phosphoribosyltransferase pro ...	This family matches three types of P-loop containing kinases: phosphoribulokinases [1], uridine kinases [2] and bacterial pantothenate kinases(CoaA) [3]. Arabidopsis and other organisms have a dual uridine kinase/uracil phosphoribosyltransferase protein where the N-terminal region consists of a UK domain and the C-terminal region of a UPRT domain [4].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth P], N [auth C], O [auth H], P [auth M]	CP12 polypeptide	-	regulation of cellular process photosynthesis negative regulation of biological process photosynthesis, dark reaction regulation of photosynthesis, dark reaction regulation of reductive pentose-phosphate cycle regulation of primary metabolic process negative regulation of cellular process regulation of carbohydrate metabolic process negative regulation of carbohydrate metabolic process regulation of biosynthetic process carbohydrate metabolic process regulation of biological process regulation of photosynthesis regulation of cellular process photosynthesis negative regulation of biological process photosynthesis, dark reaction regulation of photosynthesis, dark reaction regulation of reductive pentose-phosphate cycle regulation of primary metabolic process negative regulation of cellular process regulation of carbohydrate metabolic process negative regulation of carbohydrate metabolic process regulation of biosynthetic process carbohydrate metabolic process regulation of biological process regulation of photosynthesis negative regulation of metabolic process carbohydrate biosynthetic process biological regulation primary metabolic process biosynthetic process negative regulation of biosynthetic process reductive pentose-phosphate cycle cellular process metabolic process negative regulation of photosynthesis regulation of carbohydrate biosynthetic process regulation of metabolic process negative regulation of reductive pentose-phosphate cycle carbon fixation	-
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	Glyceraldehyde-3-phosphate dehydrogenase	oxidoreductase activity glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor binding nucleoside phosphate binding purine nucleotide binding adenyl nucleotide binding nucleotide binding heterocyclic compound binding NADP binding small molecule binding oxidoreductase activity glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity oxidoreductase activity, acting on the aldehyde or oxo group of donors catalytic activity oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor binding nucleoside phosphate binding purine nucleotide binding adenyl nucleotide binding nucleotide binding heterocyclic compound binding NADP binding small molecule binding glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity NAD binding cation binding ion binding metal ion binding	monosaccharide metabolic process carbohydrate metabolic process hexose metabolic process small molecule metabolic process metabolic process cellular process primary metabolic process glucose metabolic process	-
J, K [auth B], L [auth G], M [auth L]	Phosphoribulokinase	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding kinase activity transferase activity catalytic activity phosphotransferase activity, alcohol group as acceptor phosphoribulokinase activity transferase activity, transferring phosphorus-containing groups	carbohydrate metabolic process biosynthetic process photosynthesis reductive pentose-phosphate cycle carbohydrate biosynthetic process photosynthesis, dark reaction primary metabolic process metabolic process cellular process carbon fixation	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth P], N [auth C], O [auth H], P [auth M]	IPR039314	Calvin cycle protein CP12-like	Family
A [auth P], N [auth C], O [auth H], P [auth M]	IPR003823	CP12 domain	Domain
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	IPR036291	NAD(P)-binding domain superfamily	Homologous Superfamily
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	IPR020831	Glyceraldehyde/Erythrose phosphate dehydrogenase family	Family
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	IPR020829	Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain	Domain
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	IPR020828	Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain	Domain
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	IPR020830	Glyceraldehyde 3-phosphate dehydrogenase, active site	Active Site
B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], B [auth D], C [auth A], D [auth E], E [auth F], F [auth I], G [auth K], H [auth N], I [auth O]	IPR006424	Glyceraldehyde-3-phosphate dehydrogenase, type I	Family
J, K [auth B], L [auth G], M [auth L]	IPR006083	Phosphoribulokinase/uridine kinase	Domain
J, K [auth B], L [auth G], M [auth L]	IPR006082	Phosphoribulokinase	Family
J, K [auth B], L [auth G], M [auth L]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.