6GSR

Single Particle Cryo-EM map of human Transferrin receptor 1 - H-Ferritin complex at 5.5 Angstrom resolution.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
B [auth Ab]SCOP2B SuperfamilyTransferrin receptor-like dimerisation domain8037591 3000375 SCOP2B (2022-06-29)
B [auth Ab]SCOP2B SuperfamilyZn-dependent exopeptidases8032205 3000662 SCOP2B (2022-06-29)
B [auth Ab]SCOP2B SuperfamilyZn-dependent exopeptidases8032205 3000662 SCOP2B (2022-06-29)
B [auth Ab]SCOP2B SuperfamilyPA domain8043922 3000955 SCOP2B (2022-06-29)
Q [auth Aq]SCOP2B SuperfamilyTransferrin receptor-like dimerisation domain8037591 3000375 SCOP2B (2022-06-29)
Q [auth Aq]SCOP2B SuperfamilyZn-dependent exopeptidases8032205 3000662 SCOP2B (2022-06-29)
Q [auth Aq]SCOP2B SuperfamilyPA domain8043922 3000955 SCOP2B (2022-06-29)
Q [auth Aq]SCOP2B SuperfamilyZn-dependent exopeptidases8032205 3000662 SCOP2B (2022-06-29)
A [auth Aa]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
C [auth Ac]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
D [auth Ad]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
E [auth Ae]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
F [auth Af]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
G [auth Ag]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
H [auth Ah]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
I [auth Ai]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
J [auth Aj]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
K [auth Ak]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
L [auth Al]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
M [auth Am]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
O [auth Ao]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
P [auth Ap]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
R [auth Ar]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
S [auth As]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
T [auth At]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
U [auth Au]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
V [auth Av]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
W [auth Aw]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
X [auth Ax]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
Y [auth Ay]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
Z [auth Az]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)
N [auth An]SCOP2B SuperfamilyFerritin-like8038756 3001658 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
B [auth Ab]PF04253e6gsrAb3 A: alpha bundlesX: N-cbl likeH: Transferrin receptor ectodomain, C-terminal domain (From Topology)T: Transferrin receptor ectodomain, C-terminal domainF: PF04253ECOD (1.6)
B [auth Ab]PF04389e6gsrAb1 A: a/b three-layered sandwichesX: Phosphorylase/hydrolase-likeH: Zn-dependent exopeptidases (From Topology)T: Zn-dependent exopeptidasesF: PF04389ECOD (1.6)
B [auth Ab]PF02225e6gsrAb2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF02225ECOD (1.6)
Q [auth Aq]PF04253e6gsrAq1 A: alpha bundlesX: N-cbl likeH: Transferrin receptor ectodomain, C-terminal domain (From Topology)T: Transferrin receptor ectodomain, C-terminal domainF: PF04253ECOD (1.6)
Q [auth Aq]PF04389e6gsrAq3 A: a/b three-layered sandwichesX: Phosphorylase/hydrolase-likeH: Zn-dependent exopeptidases (From Topology)T: Zn-dependent exopeptidasesF: PF04389ECOD (1.6)
Q [auth Aq]PF02225e6gsrAq2 A: a/b three-layered sandwichesX: The swivelling beta/beta/alpha domainsH: The swivelling beta/beta/alpha domain (From Topology)T: The swivelling beta/beta/alpha domainF: PF02225ECOD (1.6)
A [auth Aa]PF00210e6gsrAa1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
C [auth Ac]PF00210e6gsrAc1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
D [auth Ad]PF00210e6gsrAd1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
E [auth Ae]PF00210e6gsrAe1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
F [auth Af]PF00210e6gsrAf1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
G [auth Ag]PF00210e6gsrAg1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
H [auth Ah]PF00210e6gsrAh1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
I [auth Ai]PF00210e6gsrAi1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
J [auth Aj]PF00210e6gsrAj1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
K [auth Ak]PF00210e6gsrAk1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
L [auth Al]PF00210e6gsrAl1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
M [auth Am]PF00210e6gsrAm1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
O [auth Ao]PF00210e6gsrAo1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
P [auth Ap]PF00210e6gsrAp1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
R [auth Ar]PF00210e6gsrAr1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
S [auth As]PF00210e6gsrAs1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
T [auth At]PF00210e6gsrAt1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
U [auth Au]PF00210e6gsrAu1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
V [auth Av]PF00210e6gsrAv1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
W [auth Aw]PF00210e6gsrAw1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
X [auth Ax]PF00210e6gsrAx1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
Y [auth Ay]PF00210e6gsrAy1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
Z [auth Az]PF00210e6gsrAz1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)
N [auth An]PF00210e6gsrAn1 A: alpha bundlesX: Ferritin/Heme oxygenase/4-helical cytokinesH: Ferritin/Heme oxygenaseT: FerritinF: PF00210ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
B [auth Ab],
Q [auth Aq]
PF04253Transferrin receptor-like dimerisation domain (TFR_dimer)Transferrin receptor-like dimerisation domainThis domain is involved in dimerisation of the transferrin receptor as shown in its crystal structure.Domain
B [auth Ab],
Q [auth Aq]
PF04389Peptidase family M28 (Peptidase_M28)Peptidase family M28- Family
B [auth Ab],
Q [auth Aq]
PF02225PA domain (PA)PA domain- Family
PF00210Ferritin-like domain (Ferritin)Ferritin-like domainThis family contains ferritins and other ferritin-like proteins such as members of the DPS family and bacterioferritins.Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
B [auth Ab],
Q [auth Aq]
Transferrin receptor protein 1
Ferritin heavy chain

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
B [auth Ab],
Q [auth Aq]
IPR036757Transferrin receptor-like, dimerisation domain superfamilyHomologous Superfamily
B [auth Ab],
Q [auth Aq]
IPR039373Transferrin receptor protein 1/Glutamate carboxypeptidase 2-likeFamily
B [auth Ab],
Q [auth Aq]
IPR003137PA domainDomain
B [auth Ab],
Q [auth Aq]
IPR046450PA domain superfamilyHomologous Superfamily
B [auth Ab],
Q [auth Aq]
IPR007365Transferrin receptor-like, dimerisation domainDomain
B [auth Ab],
Q [auth Aq]
IPR037324Transferrin receptor protein 1/2, PA domainDomain
B [auth Ab],
Q [auth Aq]
IPR007484Peptidase M28Domain
IPR009040Ferritin-like diiron domainDomain
IPR012347Ferritin-likeHomologous Superfamily
IPR009078Ferritin-like superfamilyHomologous Superfamily
IPR001519FerritinFamily
IPR014034Ferritin, conserved siteConserved Site
IPR008331Ferritin/DPS protein domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
B [auth Ab],
Q [auth Aq]
PharosP02786
PharosP02794