6F2S | pdb_00006f2s

CryoEM structure of Ageratum Yellow Vein virus (AYVV)


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
S [auth H]Gemini_coate6f2sH1 A: a/b three-layered sandwichesX: RNase A-likeH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Gemini_coatECOD (v294.1)
Q [auth I]DUF5630e6f2sI1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
U [auth G]DUF5630e6f2sG1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
O [auth J]DUF5630e6f2sJ1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
M [auth K]DUF5630e6f2sK1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
K [auth C]DUF5630e6f2sC1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
I [auth D]DUF5630e6f2sD1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
G [auth E]DUF5630e6f2sE1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
E [auth F]DUF5630e6f2sF1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
C [auth B]DUF5630e6f2sB1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)
ADUF5630e6f2sA1 A: a/b three-layered sandwichesX: RNase A-likeH: Cytochrome P450T: Cytochrome P450F: DUF5630ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
S [auth H]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
Q [auth I]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
U [auth G]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
O [auth J]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
M [auth K]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
K [auth C]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
G [auth E]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
E [auth F]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)
C [auth B]2.60.120.20 Mainly Beta Sandwich Jelly Rolls CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
T [auth S]ssDNA loop associated with subunit H---
S [auth H]coat protein subunit H
Q [auth I]coat protein subunit I
ssDNA loop---
Capsid protein