6E8M | pdb_00006e8m

Legionella Longbeachae LeSH (Llo2327) bound to the human DnaJ-A1 pTyr381 peptide

External Resource: Annotation

Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations
Protein Modification Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A		e6e8mA1	A: L-aspartase middle domain-like	X: L-aspartase middle domain-like	H: L-aspartase middle domain-like	T: SH2	F:	ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF00017	SH2 domain (SH2)	SH2 domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B	DnaJ-A1 pTyr381 peptide	protein binding binding C3HC4-type RING finger domain binding protein domain specific binding ATPase activator activity molecular function activator activity molecular function regulator activity ATPase regulator activity transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding Tat protein binding Hsp70 protein binding protein-folding chaperone binding protein binding binding C3HC4-type RING finger domain binding protein domain specific binding ATPase activator activity molecular function activator activity molecular function regulator activity ATPase regulator activity transcription factor binding RNA polymerase II-specific DNA-binding transcription factor binding DNA-binding transcription factor binding Tat protein binding Hsp70 protein binding protein-folding chaperone binding heat shock protein binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding unfolded protein binding ubiquitin protein ligase binding ubiquitin-like protein ligase binding enzyme binding low-density lipoprotein particle receptor binding signaling receptor binding lipoprotein particle receptor binding G protein-coupled receptor binding cation binding transition metal ion binding zinc ion binding metal ion binding	protein refolding primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process cellular response to stimulus regulation of cellular process response to stimulus protein refolding primary metabolic process gene expression macromolecule biosynthetic process protein maturation protein folding biosynthetic process metabolic process cellular process protein metabolic process macromolecule metabolic process cellular response to stimulus regulation of cellular process response to stimulus regulation of catalytic activity negative regulation of biological process negative regulation of catalytic activity regulation of signal transduction regulation of transferase activity regulation of MAP kinase activity intracellular signal transduction regulation of primary metabolic process cell communication negative regulation of kinase activity negative regulation of JNK cascade JNK cascade phosphate-containing compound metabolic process intracellular signaling cassette negative regulation of protein modification process signal transduction phosphorus metabolic process protein modification process negative regulation of protein metabolic process regulation of biological process protein phosphorylation phosphorylation regulation of protein metabolic process negative regulation of metabolic process regulation of JNK cascade regulation of MAPK cascade regulation of molecular function regulation of kinase activity regulation of response to stimulus negative regulation of protein phosphorylation regulation of protein serine/threonine kinase activity macromolecule modification regulation of phosphorus metabolic process regulation of metabolic process regulation of protein modification process regulation of protein phosphorylation signaling negative regulation of signaling negative regulation of intracellular signal transduction negative regulation of phosphate metabolic process negative regulation of cell communication regulation of intracellular signal transduction negative regulation of protein serine/threonine kinase activity negative regulation of cellular process negative regulation of JUN kinase activity negative regulation of macromolecule metabolic process regulation of signaling negative regulation of response to stimulus biological regulation negative regulation of molecular function negative regulation of MAP kinase activity regulation of protein kinase activity regulation of macromolecule metabolic process negative regulation of protein kinase activity negative regulation of signal transduction negative regulation of phosphorus metabolic process regulation of JUN kinase activity MAPK cascade regulation of cell communication regulation of phosphorylation negative regulation of phosphorylation negative regulation of MAPK cascade negative regulation of programmed cell death regulation of apoptotic process regulation of programmed cell death cell death negative regulation of apoptotic process apoptotic process programmed cell death negative regulation of post-translational protein modification regulation of protein ubiquitination protein ubiquitination negative regulation of protein ubiquitination regulation of protein modification by small protein conjugation or removal negative regulation of protein modification by small protein conjugation or removal regulation of post-translational protein modification post-translational protein modification protein modification by small protein conjugation protein modification by small protein conjugation or removal response to topologically incorrect protein response to stress response to unfolded protein positive regulation of programmed cell death positive regulation of biological process positive regulation of apoptotic process positive regulation of cellular process regulation of localization establishment of protein localization regulation of protein localization regulation of transport transport regulation of establishment of protein localization regulation of protein transport establishment of localization localization protein transport macromolecule localization intracellular protein localization protein localization to organelle protein localization to mitochondrion regulation of cellular response to stress cellular response to nitrosative stress negative regulation of apoptotic signaling pathway negative regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway intrinsic apoptotic signaling pathway response to chemical regulation of nitrosative stress-induced intrinsic apoptotic signaling pathway regulation of apoptotic signaling pathway response to nitrosative stress cellular response to chemical stress regulation of intrinsic apoptotic signaling pathway cellular response to stress regulation of response to stress apoptotic signaling pathway negative regulation of intrinsic apoptotic signaling pathway cellular response to chemical stimulus intrinsic apoptotic signaling pathway in response to nitrosative stress negative regulation of protein localization to mitochondrion regulation of protein localization to mitochondrion negative regulation of protein localization response to heat response to abiotic stimulus response to temperature stimulus	membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space membrane-bounded organelle intracellular organelle cellular anatomical structure intracellular anatomical structure mitochondrion organelle cytoplasm intracellular membrane-bounded organelle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cytosol cytoskeleton membraneless organelle intracellular membraneless organelle microtubule cytoskeleton organelle subcompartment cytoplasmic side of membrane endomembrane system side of membrane endoplasmic reticulum subcompartment nuclear outer membrane-endoplasmic reticulum membrane network endoplasmic reticulum cytoplasmic side of endoplasmic reticulum membrane organelle membrane endoplasmic reticulum membrane perinuclear region of cytoplasm nucleus
A	LeSH (Llo2327)	-	-	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
B	IPR044713	DnaJ homolog subfamily A member 1/2-like	Family
B	IPR001305	Heat shock protein DnaJ, cysteine-rich domain	Domain
B	IPR001623	DnaJ domain	Domain
B	IPR012724	Chaperone DnaJ	Family
B	IPR018253	DnaJ domain, conserved site	Conserved Site
B	IPR002939	Chaperone DnaJ, C-terminal	Domain
B	IPR036869	Chaperone J-domain superfamily	Homologous Superfamily
B	IPR008971	HSP40/DnaJ peptide-binding	Homologous Superfamily
B	IPR036410	Heat shock protein DnaJ, cysteine-rich domain superfamily	Homologous Superfamily
A	IPR036860	SH2 domain superfamily	Homologous Superfamily
A	IPR000980	SH2 domain	Domain

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
B	Pharos: P31689	mouth disease breast cancer dermatomyositis juvenile dermatomyositis malignant colon neoplasm non-small cell lung carcinoma plasma cell myeloma Crohn disease diabetes mellitus large cell medulloblastoma osteosarcoma psoriasis cutaneous lupus erythematosus invasive ductal breast carcinoma lung adenocarcinoma mouth disease breast cancer dermatomyositis juvenile dermatomyositis malignant colon neoplasm non-small cell lung carcinoma plasma cell myeloma Crohn disease diabetes mellitus large cell medulloblastoma osteosarcoma psoriasis cutaneous lupus erythematosus invasive ductal breast carcinoma lung adenocarcinoma myopathy ovarian cancer

Protein Modification Annotation

Modified Residue(s)
Chain	Residue(s)	Description
B	PTR	Parent Component: TYR RESID: AA0039 PSI-MOD : O4'-phospho-L-tyrosine MOD:00048

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

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