6E5N

Solution structure of human Myosin VI isoform 3 (1050-1131) in complex with Clathrin light chain a (46-61)

External Resource: Annotation

Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth A]	PF01086	Clathrin light chain (Clathrin_lg_ch)	Clathrin light chain	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B]	Unconventional myosin-VI	cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding cytoskeletal motor activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding cytoskeletal protein binding actin binding protein-containing complex binding protein binding binding actin filament binding cytoskeletal motor activity adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding organic cyclic compound binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding ADP binding calmodulin binding identical protein binding minus-end directed microfilament motor activity microfilament motor activity ATP-dependent activity	response to stimulus response to chemical response to xenobiotic stimulus multicellular organismal process system process sensory perception nervous system process sensory perception of sound sensory perception of mechanical stimulus cellular developmental process sensory organ development epidermis development epithelial cell differentiation hair cell differentiation response to stimulus response to chemical response to xenobiotic stimulus multicellular organismal process system process sensory perception nervous system process sensory perception of sound sensory perception of mechanical stimulus cellular developmental process sensory organ development epidermis development epithelial cell differentiation hair cell differentiation neurogenesis multicellular organism development neuron differentiation inner ear development cell differentiation anatomical structure development system development developmental process mechanoreceptor differentiation epithelium development epidermal cell differentiation ear development animal organ development inner ear auditory receptor cell differentiation nervous system development tissue development inner ear receptor cell differentiation generation of neurons cellular process cellular component organization organelle organization actin cytoskeleton organization actin filament organization actin filament-based process cellular component organization or biogenesis supramolecular fiber organization cytoskeleton organization actin filament-based movement ear morphogenesis embryonic organ morphogenesis embryonic morphogenesis embryo development anatomical structure morphogenesis sensory organ morphogenesis inner ear morphogenesis animal organ morphogenesis embryonic organ development localization import into cell transport endocytosis establishment of localization vesicle-mediated transport protein localization cellular localization establishment of protein localization nitrogen compound transport organic substance transport intracellular transport protein transport establishment of localization in cell cellular macromolecule localization macromolecule localization intracellular protein transport regulation of localization regulation of biological process regulation of transport secretion biological regulation regulation of secretion cellular response to stimulus regulation of cellular process signaling signal transduction by p53 class mediator DNA damage response, signal transduction by p53 class mediator intracellular signal transduction cell communication cellular response to stress DNA damage response response to stress signal transduction in response to DNA damage signal transduction vesicle transport along actin filament vesicle cytoskeletal trafficking vesicle localization establishment of organelle localization establishment of vesicle localization organelle localization cytoskeleton-dependent intracellular transport actin filament-based transport	clathrin-coated pit membrane cellular anatomical entity endomembrane system apical part of cell membrane-bounded organelle intracellular anatomical structure nuclear membrane nucleus intracellular membrane-bounded organelle intracellular organelle organelle envelope organelle nuclear envelope clathrin-coated pit membrane cellular anatomical entity endomembrane system apical part of cell membrane-bounded organelle intracellular anatomical structure nuclear membrane nucleus intracellular membrane-bounded organelle intracellular organelle organelle envelope organelle nuclear envelope organelle membrane extracellular exosome extracellular vesicle extracellular organelle extracellular region extracellular space vesicle extracellular membrane-bounded organelle cytoskeleton intracellular non-membrane-bounded organelle actin cytoskeleton non-membrane-bounded organelle cytoplasm cytosol intracellular vesicle cytoplasmic vesicle endocytic vesicle coated vesicle membrane cytoplasmic vesicle membrane bounding membrane of organelle vesicle membrane clathrin-coated vesicle coated vesicle clathrin-coated vesicle membrane protein-containing complex myosin complex unconventional myosin complex vacuole autophagosome vacuolar membrane lytic vacuole lytic vacuole membrane lysosomal membrane lysosome Golgi apparatus ruffle cell projection cell leading edge plasma membrane bounded cell projection actin-based cell projection microvillus perinuclear region of cytoplasm polymeric cytoskeletal fiber actin filament supramolecular fiber supramolecular polymer supramolecular complex filamentous actin filopodium cell periphery cell cortex plasma membrane leading edge membrane ruffle membrane plasma membrane region cell projection membrane membrane-enclosed lumen intracellular organelle lumen nucleoplasm organelle lumen nuclear lumen endosome
B [auth A]	Clathrin light chain A	protein binding binding enzyme binding GTPase binding clathrin heavy chain binding clathrin binding protein-containing complex binding peptide binding structural molecule activity	cellular process cell division localization import into cell transport clathrin-dependent endocytosis receptor-mediated endocytosis endocytosis establishment of localization vesicle-mediated transport cell cycle protein localization cellular localization establishment of protein localization cellular process cell division localization import into cell transport clathrin-dependent endocytosis receptor-mediated endocytosis endocytosis establishment of localization vesicle-mediated transport cell cycle protein localization cellular localization establishment of protein localization nitrogen compound transport organic substance transport intracellular transport protein transport establishment of localization in cell cellular macromolecule localization macromolecule localization intracellular protein transport clathrin coat assembly cellular component organization cellular component biogenesis cellular component assembly protein-containing complex organization protein-containing complex assembly cellular component organization or biogenesis	protein-containing complex intracellular anatomical structure plasma membrane protein complex membrane plasma membrane membrane protein complex cellular anatomical entity coated membrane endomembrane system clathrin coat membrane coat cell periphery clathrin-coated pit cytoplasm protein-containing complex intracellular anatomical structure plasma membrane protein complex membrane plasma membrane membrane protein complex cellular anatomical entity coated membrane endomembrane system clathrin coat membrane coat cell periphery clathrin-coated pit cytoplasm clathrin coat of coated pit presynaptic endocytic zone synapse presynaptic membrane synaptic membrane presynapse presynaptic endocytic zone membrane cell junction plasma membrane region endosome membrane membrane-bounded organelle endolysosome membrane intracellular vesicle lytic vacuole intracellular organelle bounding membrane of organelle endolysosome vesicle membrane cytoplasmic vesicle vesicle lysosome vacuolar membrane endosome vacuole intracellular membrane-bounded organelle lytic vacuole membrane cytoplasmic vesicle membrane organelle lysosomal membrane organelle membrane cytosol vesicle coat clathrin-coated vesicle clathrin vesicle coat coated vesicle clathrin-coated vesicle membrane coated vesicle membrane clathrin complex Golgi apparatus subcompartment Golgi apparatus organelle subcompartment trans-Golgi network membrane trans-Golgi network cytoskeleton spindle intracellular non-membrane-bounded organelle microtubule cytoskeleton non-membrane-bounded organelle transport vesicle membrane synaptic vesicle synaptic vesicle membrane transport vesicle exocytic vesicle membrane secretory vesicle exocytic vesicle clathrin-coated endocytic vesicle endocytic vesicle clathrin coat of trans-Golgi network vesicle trans-Golgi network transport vesicle membrane trans-Golgi network transport vesicle Golgi-associated vesicle Golgi-associated vesicle membrane cell cortex cytoplasmic region postsynaptic endocytic zone cytoplasmic component postsynaptic endocytic zone postsynapse cell cortex region

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
A [auth B]	IPR032412	Myosin VI, cargo binding domain	Domain
A [auth B]	IPR004009	Myosin, N-terminal, SH3-like	Domain
A [auth B]	IPR036961	Kinesin motor domain superfamily	Homologous Superfamily
A [auth B]	IPR049016	Myosin VI, lever arm	Domain
A [auth B]	IPR036114	Class VI myosin, motor domain	Domain
A [auth B]	IPR001609	Myosin head, motor domain	Domain
A [auth B]	IPR008989	Myosin S1 fragment, N-terminal	Homologous Superfamily
B [auth A]	IPR000996	Clathrin light chain	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A [auth B]	Pharos: Q9UM54	nonsyndromic genetic deafness autosomal recessive nonsyndromic deafness 37 autosomal dominant nonsyndromic deafness 22 cardiomyopathy malignant mesothelioma Organic Mental Disorders, Substance-Induced pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia progressive supranuclear palsy spina bifida autosomal dominant nonsyndromic deafness 1 substance dependence breast cancer hypertrophic cardiomyopathy lung adenocarcinoma medulloblastoma nonsyndromic genetic deafness autosomal recessive nonsyndromic deafness 37 autosomal dominant nonsyndromic deafness 22 cardiomyopathy malignant mesothelioma Organic Mental Disorders, Substance-Induced pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia progressive supranuclear palsy spina bifida autosomal dominant nonsyndromic deafness 1 substance dependence breast cancer hypertrophic cardiomyopathy lung adenocarcinoma medulloblastoma ovarian cancer Pick disease prostate carcinoma substance abuse breast fibroadenoma tuberculosis drug dependence ductal breast carcinoma in situ interstitial cystitis lung cancer pancreatic intraductal papillary-mucinous carcinoma substance-related disorder Down syndrome gastric carcinoma invasive ductal breast carcinoma
B [auth A]	Pharos: P09496	adrenal cortex carcinoma lymphoplasmacytic lymphoma ovarian cancer psoriasis breast cancer myopathy pituitary cancer Sjogren syndrome Crohn disease osteosarcoma plasma cell myeloma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.