6E36

The structure of the variable domain of Streptococcus intermedius antigen I/II (Pas)

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
A	d6e36a_	All beta proteins	Supersandwich	V-region of surface antigen I/II (SA I/II, PAC)	V-region of surface antigen I/II (SA I/II, PAC)	automated matches	(Streptococcus intermedius ) [TaxId: 1338 ],	SCOPe (2.08)
B	d6e36b_	All beta proteins	Supersandwich	V-region of surface antigen I/II (SA I/II, PAC)	V-region of surface antigen I/II (SA I/II, PAC)	automated matches	(Streptococcus intermedius ) [TaxId: 1338 ],	SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	PF06696,PF08363	e6e36A1	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: V-region of surface antigen I/II (SA I/II, PAC) (From Topology)	T: V-region of surface antigen I/II (SA I/II, PAC)	F: PF06696,PF08363	ECOD (1.6)
B	PF06696,PF08363	e6e36B1	A: beta sandwiches	X: Glycosyl hydrolase domain-like	H: V-region of surface antigen I/II (SA I/II, PAC) (From Topology)	T: V-region of surface antigen I/II (SA I/II, PAC)	F: PF06696,PF08363	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B	PF06696	Streptococcal surface antigen repeat (Strep_SA_rep)	Streptococcal surface antigen repeat	-	Repeat
A, B	PF08363	Glucan-binding protein C (GbpC)	Glucan-binding protein C	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B	Probable cell-surface antigen I/II	-	-	extracellular region cellular anatomical entity

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B	IPR009578	Cell surface antigen I/II A repeat	Repeat
A, B	IPR013574	Glucan-binding protein C/Surface antigen I/II, V-domain	Domain
A, B	IPR041324	Antigen I/II, N-terminal	Domain
A, B	IPR032300	Cell surface antigen, C-terminal	Domain
A, B	IPR036234	Glucan-binding protein C/Surface antigen I/II, V-domain superfamily	Homologous Superfamily
A, B	IPR026345	Adhesin isopeptide-forming adherence domain	Domain
A, B	IPR021197	Cross-wall-targeting lipoprotein motif	Conserved Site
A, B	IPR019931	LPXTG cell wall anchor domain	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM133198.