The structure of the variable domain of Streptococcus intermedius antigen I/II (Pas)
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | d6e36b_ | All beta proteins | Supersandwich | V-region of surface antigen I/II (SA I/II, PAC) | V-region of surface antigen I/II (SA I/II, PAC) | automated matches | (Streptococcus intermedius ) [TaxId: 1338 ], | SCOPe (2.08) |
| A | d6e36a_ | All beta proteins | Supersandwich | V-region of surface antigen I/II (SA I/II, PAC) | V-region of surface antigen I/II (SA I/II, PAC) | automated matches | (Streptococcus intermedius ) [TaxId: 1338 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| B | GbpC | e6e36B1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: V-region of surface antigen I/II (SA I/II, PAC) (From Topology) | T: V-region of surface antigen I/II (SA I/II, PAC) | F: GbpC | ECOD (1.6) |
| A | GbpC | e6e36A1 | A: beta sandwiches | X: Glycosyl hydrolase domain-like | H: V-region of surface antigen I/II (SA I/II, PAC) (From Topology) | T: V-region of surface antigen I/II (SA I/II, PAC) | F: GbpC | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| B | 2.60.530.10 | Mainly Beta | Sandwich | Major cell-surface adhesin PAc | Major cell-surface adhesin PAc | CATH (utative) |
| A | 2.60.530.10 | Mainly Beta | Sandwich | Major cell-surface adhesin PAc | Major cell-surface adhesin PAc | CATH (utative) |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR009578 | Cell surface antigen I/II A repeat | Repeat | |
| IPR013574 | Glucan-binding protein C/Surface antigen I/II, V-domain | Domain | |
| IPR041324 | Antigen I/II, N-terminal | Domain | |
| IPR032300 | Cell surface antigen, C-terminal | Domain | |
| IPR036234 | Glucan-binding protein C/Surface antigen I/II, V-domain superfamily | Homologous Superfamily | |
| IPR026345 | Adhesin isopeptide-forming adherence domain | Domain | |
| IPR021197 | Cross-wall-targeting lipoprotein motif | Conserved Site | |
| IPR019931 | LPXTG cell wall anchor motif | Conserved Site |
