Sequence Requirements of the Listeria innocua prophage attP site
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Recombinase | e6dnwA1 | A: alpha arrays | X: HTH | H: HTH | T: tri-helical | F: Recombinase | ECOD (1.6) |
| A | Zn_ribbon_recom | e6dnwA2 | A: few secondary structure elements | X: Rubredoxin-like | H: Rubredoxin-related | T: Zinc-nucleated domain of serine integrase | F: Zn_ribbon_recom | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 3.90.1750.20 | Alpha Beta | Alpha-Beta Complex | Hect, E3 ligase catalytic domain fold | Putative Large Serine Recombinase | CATH (utative) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Putative integrase [Bacteriophage A118] | - | |||
| DNA (26-MER) | - | - | - | |
| DNA (26-MER) | - | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR011109 | DNA-binding recombinase domain | Domain | |
| IPR036162 | Resolvase-like, N-terminal catalytic domain superfamily | Homologous Superfamily | |
| IPR025827 | Recombinase zinc beta ribbon domain | Domain | |
| IPR006118 | Recombinase, conserved site | Conserved Site | |
| IPR006119 | Resolvase, N-terminal catalytic domain | Domain | |
| IPR038109 | DNA-binding recombinase domain superfamily | Homologous Superfamily | |
| IPR050639 | Site-specific recombinase resolvase | Family |














